iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131477

UUCD1 version

UUC-ViV-01130

Ensembl Protein ID

VIT_04s0008g06860.t01

UniProt Accession

F6H350; F6H350_VITVI

Genbank Protein ID

CCB46879.1

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

FN595231

Gene Name

UBP22; VIT_04s0008g06860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g06860	VIT_04s0008g06860.t01	VIT_04s0008g06860.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.50e-82	276.0	180	522

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgy 87
           Gl+NlgNtC+mNSvLQ+L++ p+lr+++l+  +  ++ + + ++++  +l + +  +f+++ +++++ +sp ++l + ++ +e++ +y
   Q: 180  GLNNLGNTCFMNSVLQALFHAPPLRNYFLSdrH--NRQSCRRRSSDRLCLPCDIDVIFSAVFSGDRTPYSPARFLYSWWQHSENLASY 265
           9*****************************544..4444455689******************************************* PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           eqqDa+Ef+  +ldq++ +                    ++ +++k+++  +++ ++ F g l+s+++c +c+ +s++++p +d+sl+
   Q: 266  EQQDAHEFFISMLDQIHVKEG------------------KSGNQDKDNRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLN 335
           ******************992..................2345688999*************************************** PP
   S: 176  vpgkeetkke...............slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrek 248
           + ++   ++                +l  cL+ ft++e+l  ++k+yc++c++++++ k++++++lP vL+lh+kRf+ s  +k+++k
   Q: 336  LDMSFCPSTGmtnrttkpnenaiisTLLGCLDLFTRPEKLGPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHIKRFEHSTIRKMSRK 423
           **77755444777778888999999*************************************************************** PP
   S: 249  inkkvefpleLdlspfcts..............peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeev 322
           i+++++fp +Ld++p+++s              + +++++++++e +avv HsG l+sGHYv+yv+  +++W+++dD  +tev+e  v
   Q: 424  IDQYLQFPFSLDMTPYLSSsivrnrfgnriftfEGDESETCTEFEVFAVVTHSGMLESGHYVTYVRV-RNRWYKCDDAWITEVDEGVV 510
           *******************999999999999996666666***************************.999***************** PP
   S: 323  leetgstaYvlfYkr 337
                s+ Y+++Y +
   Q: 511  RA---SQCYLMYYVQ 522
           99...********76 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSKQNPSYTN PKPCKHLADY KLRHGLNGFK TLQNCLKTTP YGRTSVSKHK SETPRCSLCF 60
GYQGRLYFCL ICSSITCSSH ANEHSQSHHG HEIAVDVERA ELYCCVCRDQ VYDPDFDRAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCACCCATTT ATTTAATAAA TCATTGTGTT TTATCACAAA ATCAGAGCTT CTTTCAATCC 60
CCATCAACAT GTCCAAACAA AACCCCTCAT ACACAAACCC TAAACCCTGC AAACACCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100255882

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000393	Aegilops tauschii	56.91	6.00e-117	414.00
IUUC-Aml-001480	Ailuropoda melanoleuca	37.41	6.00e-92	330.00
IUUC-Atr-002653	Amborella trichopoda	63.22	0.00e+00	689.00
IUUC-Apl-003433	Anas platyrhynchos	38.04	6.00e-90	323.00
IUUC-Aca-005347	Anolis carolinensis	35.48	4.00e-91	328.00
IUUC-Aly-006565	Arabidopsis lyrata	60.04	2.00e-174	604.00
IUUC-Ath-007536	Arabidopsis thaliana	60.04	5.00e-175	606.00
IUUC-Ago-007811	Ashbya gossypii	31.11	1.00e-49	189.00
IUUC-Acl-008124	Aspergillus clavatus	30.84	7.00e-59	220.00
IUUC-Afl-008464	Aspergillus flavus	30.82	7.00e-50	190.00
IUUC-Afu-008912	Aspergillus fumigatus	29.28	6.00e-54	204.00
IUUC-Ani-009168	Aspergillus nidulans	30.60	2.00e-57	216.00
IUUC-Ang-009694	Aspergillus niger	30.80	3.00e-56	211.00
IUUC-Aor-010035	Aspergillus oryzae	32.82	9.00e-37	146.00
IUUC-Ate-010382	Aspergillus terreus	31.15	1.00e-49	189.00
IUUC-Ame-011253	Astyanax mexicanus	35.71	1.00e-77	282.00
IUUC-Bgr-012150	Blumeria graminis	28.57	2.00e-45	176.00
IUUC-Bta-013303	Bos taurus	37.17	2.00e-92	332.00
IUUC-Bci-013604	Botrytis cinerea	30.45	2.00e-59	222.00
IUUC-Bdi-014171	Brachypodium distachyon	52.51	1.00e-145	508.00
IUUC-Bol-016509	Brassica oleracea	59.74	1.00e-171	595.00
IUUC-Bra-016962	Brassica rapa	58.88	3.00e-157	547.00
IUUC-Cja-019283	Callithrix jacchus	39.11	3.00e-84	304.00
IUUC-Cfa-020956	Canis familiaris	38.99	8.00e-92	330.00
IUUC-Cpo-022354	Cavia porcellus	37.69	5.00e-94	337.00
IUUC-Csa-023145	Chlorocebus sabaeus	36.82	2.00e-92	332.00
IUUC-Cho-024863	Choloepus hoffmanni	29.24	1.00e-27	117.00
IUUC-Cin-025109	Ciona intestinalis	36.48	1.00e-58	219.00
IUUC-Csv-026214	Ciona savignyi	34.38	3.00e-74	271.00
IUUC-Cgl-026457	Colletotrichum gloeosporioides	31.68	2.00e-56	212.00
IUUC-Cne-027085	Cryptococcus neoformans	30.39	2.00e-61	229.00
IUUC-Cme-027115	Cyanidioschyzon merolae	28.83	5.00e-24	106.00
IUUC-Dre-027433	Danio rerio	40.17	2.00e-89	322.00
IUUC-Dno-030095	Dasypus novemcinctus	39.34	2.00e-89	322.00
IUUC-Dse-031415	Dothistroma septosporum	30.51	6.00e-65	240.00
IUUC-Dme-032074	Drosophila melanogaster	33.03	2.00e-70	258.00
IUUC-Ete-033175	Echinops telfairi	31.18	1.00e-51	196.00
IUUC-Eca-033957	Equus caballus	37.90	5.00e-91	327.00
IUUC-Fca-035768	Felis catus	38.24	3.00e-92	331.00
IUUC-Fal-037645	Ficedula albicollis	37.99	3.00e-89	321.00
IUUC-Fox-038046	Fusarium oxysporum	29.96	1.00e-52	199.00
IUUC-Fso-038321	Fusarium solani	30.73	3.00e-50	191.00
IUUC-Gmo-038474	Gadus morhua	41.95	8.00e-60	223.00
IUUC-Ggr-040044	Gaeumannomyces graminis	30.24	4.00e-52	197.00
IUUC-Gga-040624	Gallus gallus	36.35	2.00e-92	331.00
IUUC-Gac-042197	Gasterosteus aculeatus	36.84	3.00e-91	328.00
IUUC-Gma-043469	Glycine max	65.47	0.00e+00	753.00
IUUC-Ggo-044409	Gorilla gorilla	37.12	2.00e-92	332.00
IUUC-Hsa-046521	Homo sapiens	36.64	2.00e-92	332.00
IUUC-Hvu-047739	Hordeum vulgare	61.05	2.00e-130	457.00
IUUC-Itr-048375	Ictidomys tridecemlineatus	37.01	6.00e-92	330.00
IUUC-Kpa-049135	Komagataella pastoris	32.57	2.00e-66	245.00
IUUC-Lch-050537	Latimeria chalumnae	37.05	3.00e-93	335.00
IUUC-Lpe-050969	Leersia perrieri	62.89	8.00e-133	466.00
IUUC-Loc-052765	Lepisosteus oculatus	33.88	1.00e-74	273.00
IUUC-Lma-053105	Leptosphaeria maculans	29.71	6.00e-57	214.00
IUUC-Laf-053947	Loxodonta africana	38.12	2.00e-92	332.00
IUUC-Mcc-055166	Macaca mulatta	36.82	2.00e-92	332.00
IUUC-Mor-057103	Magnaporthe oryzae	29.16	2.00e-52	199.00
IUUC-Mpo-057621	Magnaporthe poae	28.51	3.00e-51	195.00
IUUC-Mtr-057894	Medicago truncatula	64.31	0.00e+00	712.00
IUUC-Mla-059185	Melampsora laricipopulina	29.16	5.00e-45	174.00
IUUC-Mga-059709	Meleagris gallopavo	38.04	6.00e-90	323.00
IUUC-Mvi-060530	Microbotryum violaceum	31.61	2.00e-55	209.00
IUUC-Mmr-060988	Microcebus murinus	37.20	4.00e-93	334.00
IUUC-Mdo-063065	Monodelphis domestica	36.67	2.00e-92	332.00
IUUC-Mmu-063829	Mus musculus	37.50	4.00e-92	330.00
IUUC-Mac-065419	Musa acuminata	50.27	8.00e-144	502.00
IUUC-Mpu-066433	Mustela putorius furo	38.12	1.00e-92	333.00
IUUC-Mlu-067330	Myotis lucifugus	38.48	2.00e-92	332.00
IUUC-Nfi-068423	Neosartorya fischeri	28.82	2.00e-53	202.00
IUUC-Ncr-068809	Neurospora crassa	30.21	9.00e-53	200.00
IUUC-Nle-069859	Nomascus leucogenys	36.99	3.00e-89	322.00
IUUC-Opr-070469	Ochotona princeps	37.60	5.00e-59	221.00
IUUC-Ont-071961	Oreochromis niloticus	36.65	9.00e-89	320.00
IUUC-Oan-073565	Ornithorhynchus anatinus	35.50	3.00e-85	308.00
IUUC-Ocu-074951	Oryctolagus cuniculus	38.20	1.00e-91	329.00
IUUC-Oba-075688	Oryza barthii	53.26	3.00e-143	501.00
IUUC-Obr-076652	Oryza brachyantha	62.27	1.00e-132	465.00
IUUC-Ogl-077910	Oryza glaberrima	53.14	4.00e-145	507.00
IUUC-Ogu-078479	Oryza glumaepatula	53.14	4.00e-145	507.00
IUUC-Oin-079697	Oryza indica	62.53	3.00e-132	464.00
IUUC-Olo-080811	Oryza longistaminata	60.27	2.00e-97	347.00
IUUC-Ome-081706	Oryza meridionalis	55.33	1.00e-142	499.00
IUUC-Oni-083070	Oryza nivara	52.96	2.00e-144	505.00
IUUC-Opu-083605	Oryza punctata	61.48	3.00e-125	440.00
IUUC-Oru-084522	Oryza rufipogon	53.14	4.00e-145	507.00
IUUC-Osa-085351	Oryza sativa	62.53	1.00e-132	466.00
IUUC-Ola-086743	Oryzias latipes	40.83	2.00e-82	298.00
IUUC-Olu-087695	Ostreococcus lucimarinus	34.44	3.00e-56	211.00
IUUC-Oga-089131	Otolemur garnettii	36.19	1.00e-91	329.00
IUUC-Oar-089610	Ovis aries	38.99	2.00e-91	328.00
IUUC-Ptr-091479	Pan troglodytes	36.53	2.00e-89	322.00
IUUC-Pan-092927	Papio anubis	36.82	2.00e-92	332.00
IUUC-Psi-093670	Pelodiscus sinensis	38.04	5.00e-90	323.00
IUUC-Pma-094323	Petromyzon marinus	35.81	9.00e-71	259.00
IUUC-Pno-095141	Phaeosphaeria nodorum	31.08	1.00e-54	206.00
IUUC-Ppa-095413	Physcomitrella patens	48.41	2.00e-151	528.00
IUUC-Pfo-096473	Poecilia formosa	38.56	8.00e-94	336.00
IUUC-Pab-097612	Pongo abelii	36.82	1.00e-92	332.00
IUUC-Pop-099893	Populus trichocarpa	67.99	0.00e+00	782.00
IUUC-Pca-100329	Procavia capensis	38.12	5.00e-92	330.00
IUUC-Ppe-101583	Prunus persica	71.66	0.00e+00	793.00
IUUC-Pva-102721	Pteropus vampyrus	36.21	2.00e-83	302.00
IUUC-Pgr-103657	Puccinia graminis	28.03	3.00e-34	139.00
IUUC-Pte-104340	Pyrenophora teres	30.70	4.00e-51	194.00
IUUC-Pyt-104782	Pyrenophora triticirepentis	31.38	4.00e-57	214.00
IUUC-Rno-105247	Rattus norvegicus	37.50	5.00e-92	330.00
IUUC-Sce-106247	Saccharomyces cerevisiae	28.17	4.00e-47	181.00
IUUC-Sja-107656	Schizosaccharomyces japonicus	30.79	2.00e-58	218.00
IUUC-Spo-108226	Schizosaccharomyces pombe	31.59	2.00e-61	228.00
IUUC-Ssl-108531	Sclerotinia sclerotiorum	30.20	4.00e-55	207.00
IUUC-Smo-109310	Selaginella moellendorffii	51.28	5.00e-148	516.00
IUUC-Sit-109716	Setaria italica	55.80	2.00e-143	501.00
IUUC-Sly-111077	Solanum lycopersicum	67.20	0.00e+00	754.00
IUUC-Stu-112203	Solanum tuberosum	70.02	0.00e+00	649.00
IUUC-Sar-113174	Sorex araneus	37.12	3.00e-81	294.00
IUUC-Sbi-114205	Sorghum bicolor	56.15	6.00e-144	503.00
IUUC-Sre-115195	Sporisorium reilianum	25.89	2.00e-46	180.00
IUUC-Ssc-115315	Sus scrofa	37.81	7.00e-92	330.00
IUUC-Tgu-116938	Taeniopygia guttata	38.51	1.00e-89	323.00
IUUC-Tru-117622	Takifugu rubripes	37.20	9.00e-94	336.00
IUUC-Tsy-119413	Tarsius syrichta	36.38	8.00e-87	313.00
IUUC-Tni-120119	Tetraodon nigroviridis	37.57	3.00e-92	331.00
IUUC-Tca-121154	Theobroma cacao	70.22	0.00e+00	825.00
IUUC-Tre-122139	Trichoderma reesei	31.65	5.00e-54	204.00
IUUC-Tvi-122599	Trichoderma virens	30.82	1.00e-55	209.00
IUUC-Tae-125608	Triticum aestivum	54.45	2.00e-156	545.00
IUUC-Tme-127115	Tuber melanosporum	33.54	1.00e-72	266.00
IUUC-Tbe-127423	Tupaia belangeri	28.82	3.00e-26	112.00
IUUC-Ttr-129006	Tursiops truncatus	38.20	2.00e-91	328.00
IUUC-Vda-129829	Verticillium dahliae	31.00	2.00e-35	142.00
IUUC-Xtr-132444	Xenopus tropicalis	36.26	1.00e-93	336.00
IUUC-Xma-133514	Xiphophorus maculatus	37.59	3.00e-93	334.00
IUUC-Yli-134357	Yarrowia lipolytica	30.24	2.00e-45	176.00
IUUC-Zma-134945	Zea mays	55.51	9.00e-138	483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence