iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108678

Ensembl Protein ID

EFJ29023

UniProt Accession

D8REZ2; D8REZ2_SELML

Genbank Protein ID

EFJ17564.1; EFJ29023.1

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

GL377613; GL377578

Gene Name

SELMODRAFT_154381; SELMODRAFT_92651

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_92651	EFJ29023	EFJ29023

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.80e-09	38.3	195	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 1    ekvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCr 52
           e++C +Cg+ + ++  ++ C++  C+  ewfH++C++ls +e++ + + w+Cp C+
   Q: 195  ETYC-ICGQVSFGD--MIACDNenCTggEWFHYQCVGLS-SETRFKAK-WYCPTCT 245
           579*.********9..*****999*999***********.66555554.******7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAIARTGVFV DDYLEYSSSL HAEVQRHLST MTELDVRAHN MMLQTREDTK TCLFLPTQQI 60
KKPSPEQEEF ERLKKEIEAN HDNIRSLCTE KVLLAQQAYD LIDSQMKRLD EDLNQFAEDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATCG CTAGAACCGG CGTCTTTGTG GACGATTATC TAGAATGTAA GTTGGAATCT 60
CTATCGCCTA TAGCAGCGGA GCTCATCGCC GGCATTGGCA TTGGATGGAT CCACAGATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING
PF00628--PHD

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

smo:SELMODRAFT_154381; smo:SELMODRAFT_92651

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	64.78	4.00e-84	303.00
IUUC-Ath-006578	Arabidopsis thaliana	61.15	6.00e-77	279.00
IUUC-Bdi-014508	Brachypodium distachyon	59.84	2.00e-85	307.00
IUUC-Bol-015751	Brassica oleracea	59.30	5.00e-80	290.00
IUUC-Bra-017962	Brassica rapa	60.92	1.00e-80	291.00
IUUC-Cel-018700	Caenorhabditis elegans	40.82	9.00e-06	45.40
IUUC-Csv-026288	Ciona savignyi	31.41	7.00e-28	116.00
IUUC-Gma-044224	Glycine max	58.94	7.00e-83	299.00
IUUC-Hvu-047275	Hordeum vulgare	61.24	3.00e-88	317.00
IUUC-Lpe-051512	Leersia perrieri	58.04	2.00e-81	295.00
IUUC-Mtr-058288	Medicago truncatula	60.23	1.00e-87	315.00
IUUC-Mac-065671	Musa acuminata	64.57	2.00e-93	334.00
IUUC-Obr-076822	Oryza brachyantha	62.20	4.00e-87	313.00
IUUC-Ogl-077432	Oryza glaberrima	61.02	1.00e-86	311.00
IUUC-Osa-085802	Oryza sativa	61.02	1.00e-86	311.00
IUUC-Ppa-096009	Physcomitrella patens	60.90	1.00e-82	298.00
IUUC-Pop-099544	Populus trichocarpa	58.65	5.00e-75	273.00
IUUC-Ppe-101698	Prunus persica	61.78	1.00e-72	265.00
IUUC-Sit-110189	Setaria italica	62.85	3.00e-83	300.00
IUUC-Sly-111209	Solanum lycopersicum	62.11	3.00e-77	280.00
IUUC-Stu-112762	Solanum tuberosum	62.11	3.00e-77	280.00
IUUC-Sbi-114379	Sorghum bicolor	61.26	1.00e-87	315.00
IUUC-Tni-119775	Tetraodon nigroviridis	30.50	6.00e-26	109.00
IUUC-Tca-121271	Theobroma cacao	58.56	4.00e-75	273.00
IUUC-Tae-122798	Triticum aestivum	60.85	4.00e-88	317.00
IUUC-Vvi-131583	Vitis vinifera	65.49	4.00e-89	319.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence