iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107632

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01165281

Gene Name

GNB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000008760.1	ENSSHAT00000010226.1	ENSSHAP00000010137.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-40	134.5	141	176
UBD/Beta-Prp	6.40e-53	180.0	47	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           gHt+  +c++f +d+ ++++s+D t+ +WD+ tg +
   Q: 141  GHTGYLSCCRFlDDNQIITSSGDTTCALWDIETGQQ 176
           8**********988****************999976 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee. 131
           + r+l gh a+++a+ +  d+ +lv++s+D+ + +wd  t   vh++   ++ v+++++ psg++++ G+ d++  ++ l+t++     
   Q: 47   TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRv 135
           56899****************************************************************************99877666 PP
   S: 132  ..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
              l gh+g  +c ++ + +n ++++s D+t+ lWd++tg+    + g h ++v sls+ ++g+++vsg++d ++klwd++ + c +t+
   Q: 136  srELPGHTGYLSCCRFLD-DNQIITSSGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRSFVSGACDASIKLWDVRDSMCRQTF 222
           779*************99.7778999********************99.**************************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvi 268
           +gh++ ++ v+f+pn+  + +gs+D + r++dlr ++ l ++++ n  +i
   Q: 223  TGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDN--II 270
           ***************************************9999854..55 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MSELEQLRQE AEQLRNQIRD ARKACGDSTL TQITAGLDPV GRIQMRTRRT LRGHLAKIYA 60
MHWGTDSRLL VSASQDGKLI IWDSYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGAAT TGGAGCAGCT GAGACAGGAG GCTGAGCAGC TCCGGAATCA GATACGGGTA 60
AGGGGCAGGC TGGAGGGTGG AGGAGTGGGC AGGTCCTAGG GCCAATGTGG GGAGTCAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0005925--C:focal adhesion
GO:0005765--C:lysosomal membrane
GO:0043209--C:myelin sheath
GO:0048471--C:perinuclear region of cytoplasm
GO:0007165--P:signal transduction

KEGG

shr:100917513

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	50.19	4.00e-74	271.00
IUUC-Aml-001395	Ailuropoda melanoleuca	98.45	0.00e+00	655.00
IUUC-Aly-006025	Arabidopsis lyrata	50.32	2.00e-83	302.00
IUUC-Ago-007831	Ashbya gossypii	38.24	5.00e-68	251.00
IUUC-Ame-011124	Astyanax mexicanus	94.12	0.00e+00	639.00
IUUC-Bgr-012079	Blumeria graminis	64.90	1.00e-131	462.00
IUUC-Bta-013430	Bos taurus	99.38	0.00e+00	662.00
IUUC-Bci-013621	Botrytis cinerea	65.31	1.00e-130	459.00
IUUC-Bol-015759	Brassica oleracea	50.32	1.00e-81	298.00
IUUC-Bra-016695	Brassica rapa	49.69	8.00e-82	296.00
IUUC-Cel-018704	Caenorhabditis elegans	85.00	1.00e-179	621.00
IUUC-Cja-019794	Callithrix jacchus	99.38	0.00e+00	662.00
IUUC-Cpo-021865	Cavia porcellus	99.38	0.00e+00	662.00
IUUC-Csa-023572	Chlorocebus sabaeus	99.38	0.00e+00	662.00
IUUC-Cin-025309	Ciona intestinalis	79.88	1.00e-169	588.00
IUUC-Csv-026258	Ciona savignyi	80.18	1.00e-169	588.00
IUUC-Cgl-026673	Colletotrichum gloeosporioides	65.20	6.00e-136	476.00
IUUC-Dre-027957	Danio rerio	94.43	0.00e+00	635.00
IUUC-Dno-029001	Dasypus novemcinctus	99.38	0.00e+00	661.00
IUUC-Dor-030322	Dipodomys ordii	88.54	5.00e-166	576.00
IUUC-Dse-031388	Dothistroma septosporum	66.18	2.00e-137	481.00
IUUC-Dme-031748	Drosophila melanogaster	81.18	2.00e-172	597.00
IUUC-Eca-034149	Equus caballus	99.38	0.00e+00	662.00
IUUC-Fca-036537	Felis catus	99.38	0.00e+00	662.00
IUUC-Fox-037946	Fusarium oxysporum	65.50	6.00e-131	460.00
IUUC-Fso-038136	Fusarium solani	65.50	6.00e-131	460.00
IUUC-Gmo-039332	Gadus morhua	94.74	0.00e+00	635.00
IUUC-Ggr-039969	Gaeumannomyces graminis	64.91	2.00e-134	471.00
IUUC-Gac-041932	Gasterosteus aculeatus	93.19	0.00e+00	629.00
IUUC-Ggo-044543	Gorilla gorilla	99.38	0.00e+00	662.00
IUUC-Hsa-046432	Homo sapiens	99.38	0.00e+00	662.00
IUUC-Itr-048049	Ictidomys tridecemlineatus	99.40	0.00e+00	684.00
IUUC-Laf-053865	Loxodonta africana	99.38	0.00e+00	662.00
IUUC-Mcc-055781	Macaca mulatta	99.34	0.00e+00	628.00
IUUC-Meu-056902	Macropus eugenii	100.00	0.00e+00	665.00
IUUC-Mor-057188	Magnaporthe oryzae	64.62	8.00e-134	469.00
IUUC-Mpo-057544	Magnaporthe poae	64.62	6.00e-135	473.00
IUUC-Mmr-061015	Microcebus murinus	99.38	0.00e+00	662.00
IUUC-Mdo-062734	Monodelphis domestica	100.00	0.00e+00	665.00
IUUC-Mmu-063737	Mus musculus	99.38	0.00e+00	662.00
IUUC-Mpu-066784	Mustela putorius furo	99.03	0.00e+00	634.00
IUUC-Mlu-067912	Myotis lucifugus	99.07	0.00e+00	660.00
IUUC-Ncr-068650	Neurospora crassa	64.33	1.00e-127	448.00
IUUC-Opr-070866	Ochotona princeps	99.38	0.00e+00	662.00
IUUC-Ont-072526	Oreochromis niloticus	93.50	0.00e+00	629.00
IUUC-Ocu-074344	Oryctolagus cuniculus	99.38	0.00e+00	662.00
IUUC-Oba-075818	Oryza barthii	48.31	2.00e-82	299.00
IUUC-Obr-076229	Oryza brachyantha	49.36	5.00e-83	301.00
IUUC-Ogl-077730	Oryza glaberrima	50.32	8.00e-86	310.00
IUUC-Ogu-078583	Oryza glumaepatula	50.38	1.00e-67	249.00
IUUC-Oin-079661	Oryza indica	50.32	9.00e-83	300.00
IUUC-Olo-080225	Oryza longistaminata	50.38	1.00e-67	249.00
IUUC-Oni-082161	Oryza nivara	50.00	2.00e-85	308.00
IUUC-Opu-084072	Oryza punctata	50.32	4.00e-86	311.00
IUUC-Oru-084316	Oryza rufipogon	50.32	9.00e-83	300.00
IUUC-Osa-085380	Oryza sativa	50.32	9.00e-83	300.00
IUUC-Oga-089046	Otolemur garnettii	99.38	0.00e+00	662.00
IUUC-Ptr-091444	Pan troglodytes	99.38	0.00e+00	662.00
IUUC-Pan-092045	Papio anubis	99.38	0.00e+00	662.00
IUUC-Pma-094748	Petromyzon marinus	90.87	1.00e-139	488.00
IUUC-Pab-097601	Pongo abelii	98.45	0.00e+00	657.00
IUUC-Pca-100940	Procavia capensis	99.38	0.00e+00	662.00
IUUC-Ppe-102016	Prunus persica	44.26	7.00e-84	303.00
IUUC-Pva-102229	Pteropus vampyrus	99.07	0.00e+00	655.00
IUUC-Rno-106104	Rattus norvegicus	99.38	0.00e+00	662.00
IUUC-Sja-107891	Schizosaccharomyces japonicus	35.57	2.00e-57	216.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	65.50	1.00e-130	459.00
IUUC-Sit-110441	Setaria italica	50.00	1.00e-85	309.00
IUUC-Sbi-114038	Sorghum bicolor	49.36	2.00e-84	305.00
IUUC-Ssc-115595	Sus scrofa	99.38	0.00e+00	662.00
IUUC-Tru-118401	Takifugu rubripes	93.19	0.00e+00	629.00
IUUC-Tni-120216	Tetraodon nigroviridis	92.88	0.00e+00	628.00
IUUC-Tre-122156	Trichoderma reesei	65.20	5.00e-135	473.00
IUUC-Tvi-122640	Trichoderma virens	65.20	5.00e-135	473.00
IUUC-Tbe-128132	Tupaia belangeri	98.44	2.00e-147	514.00
IUUC-Ttr-128403	Tursiops truncatus	99.38	0.00e+00	662.00
IUUC-Vda-129855	Verticillium dahliae	69.84	9.00e-129	452.00
IUUC-Vpa-130474	Vicugna pacos	97.79	7.00e-76	276.00
IUUC-Yli-134396	Yarrowia lipolytica	34.17	1.00e-61	229.00
IUUC-Zma-135893	Zea mays	49.04	5.00e-84	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence