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Tag Content
UUCD2 ID IUUC-Ssc-115733
UUCD1 version UUC-SuS-00522
Ensembl Protein ID ENSSSCP00000007428.2
UniProt Accession F1SEU6; F1SEU6_PIG
Genbank Protein ID ENSSSCP00000007428
Protein Name Uncharacterized protein
Genbank Nucleotide ID CU638828
Gene Name LONRF1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000006968.2 ENSSSCT00000007633.2 ENSSSCP00000007428.2
ENSSSCG00000006968.2 ENSSSCT00000027883.1 ENSSSCP00000027277.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 2.80e-09 37.6 476 514
E3 activity/RING/U-box 1.50e-09 38.0 472 519
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH f+++Cl++          + +CPlC+
   Q: 476  CSLCMRLFFE-PVTTPCGHSFCKNCLERC------LDHTPYCPLCK 514
           **********.9**************999......9*********6 PP
   

   E3 activity/RING/U-box
   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+++ ++++e++l++    cP+++++l+e
   Q: 472  SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPY-CPLCKESLKE 519
           58***********************************9.*******986 PP
   
Organism Sus scrofa
Protein Sequence
(Fasta)
VSARHAPRSS PGGSQEVAPR PPSRGRFWEV GGDGDRLERA AAESERWELL LRRGELLALG 60
GHLKGALEAY AAALRRGAPV RAECLGTLVD CLVFNYRLRH GLRWSATPAA GAPAGAGGLL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-115733|E3,RING;E3,U-box|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGTCCGCGC GCCACGCCCC CCNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-115733|E3,RING;E3,U-box|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX
SMART

SM00464--LON
SM00184--RING
SM00028--TPR
Gene Ontology

GO:0005622--C:intracellular
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001989 Ailuropoda melanoleuca 93.23 0.00e+00 1016.00
IUUC-Atr-002972 Amborella trichopoda 40.89 1.00e-43 170.00
IUUC-Apl-003309 Anas platyrhynchos 77.78 0.00e+00 641.00
IUUC-Aca-004288 Anolis carolinensis 62.30 0.00e+00 830.00
IUUC-Aly-005476 Arabidopsis lyrata 37.10 2.00e-40 159.00
IUUC-Ath-006654 Arabidopsis thaliana 37.10 7.00e-41 161.00
IUUC-Acl-008224 Aspergillus clavatus 30.96 2.00e-39 156.00
IUUC-Afu-008802 Aspergillus fumigatus 29.21 1.00e-38 154.00
IUUC-Ang-009643 Aspergillus niger 29.81 3.00e-38 153.00
IUUC-Ate-010489 Aspergillus terreus 32.57 2.00e-40 159.00
IUUC-Ame-010716 Astyanax mexicanus 50.76 0.00e+00 640.00
IUUC-Bta-012903 Bos taurus 95.46 0.00e+00 1132.00
IUUC-Bdi-014333 Brachypodium distachyon 42.11 5.00e-42 165.00
IUUC-Bol-016150 Brassica oleracea 34.98 1.00e-40 160.00
IUUC-Bra-016716 Brassica rapa 33.57 5.00e-38 151.00
IUUC-Cja-019312 Callithrix jacchus 91.57 0.00e+00 1162.00
IUUC-Cfa-020159 Canis familiaris 93.04 0.00e+00 1135.00
IUUC-Cpo-022528 Cavia porcellus 90.02 0.00e+00 959.00
IUUC-Csa-023361 Chlorocebus sabaeus 85.51 0.00e+00 1089.00
IUUC-Cho-024549 Choloepus hoffmanni 83.27 0.00e+00 836.00
IUUC-Cgl-026514 Colletotrichum gloeosporioides 32.00 2.00e-46 180.00
IUUC-Cme-027153 Cyanidioschyzon merolae 30.45 1.00e-29 123.00
IUUC-Dre-028195 Danio rerio 48.44 0.00e+00 634.00
IUUC-Dno-029284 Dasypus novemcinctus 90.60 0.00e+00 1003.00
IUUC-Dor-031123 Dipodomys ordii 78.10 0.00e+00 701.00
IUUC-Dme-031919 Drosophila melanogaster 36.36 7.00e-65 242.00
IUUC-Ete-032455 Echinops telfairi 90.57 0.00e+00 769.00
IUUC-Eca-033248 Equus caballus 95.24 0.00e+00 774.00
IUUC-Eeu-034441 Erinaceus europaeus 92.31 0.00e+00 810.00
IUUC-Fca-035551 Felis catus 93.98 0.00e+00 1040.00
IUUC-Fal-036731 Ficedula albicollis 75.52 0.00e+00 826.00
IUUC-Fso-038334 Fusarium solani 37.02 2.00e-39 157.00
IUUC-Gmo-039315 Gadus morhua 45.75 8.00e-165 573.00
IUUC-Gga-040888 Gallus gallus 77.64 0.00e+00 673.00
IUUC-Gac-042121 Gasterosteus aculeatus 50.54 0.00e+00 630.00
IUUC-Gma-042919 Glycine max 33.68 2.00e-38 153.00
IUUC-Ggo-044985 Gorilla gorilla 92.63 0.00e+00 1035.00
IUUC-Hsa-046592 Homo sapiens 90.17 0.00e+00 1146.00
IUUC-Hvu-047145 Hordeum vulgare 42.15 8.00e-25 107.00
IUUC-Itr-048573 Ictidomys tridecemlineatus 92.69 0.00e+00 1093.00
IUUC-Lch-050404 Latimeria chalumnae 57.77 0.00e+00 739.00
IUUC-Laf-053431 Loxodonta africana 90.79 0.00e+00 1000.00
IUUC-Mcc-055751 Macaca mulatta 90.62 0.00e+00 1011.00
IUUC-Meu-055901 Macropus eugenii 39.42 4.00e-102 365.00
IUUC-Mor-056963 Magnaporthe oryzae 41.21 4.00e-41 162.00
IUUC-Mtr-058075 Medicago truncatula 33.57 8.00e-43 167.00
IUUC-Mla-058946 Melampsora laricipopulina 34.00 3.00e-46 179.00
IUUC-Mvi-060228 Microbotryum violaceum 33.98 2.00e-47 184.00
IUUC-Mmr-061283 Microcebus murinus 89.13 0.00e+00 1151.00
IUUC-Mmu-063169 Mus musculus 85.19 0.00e+00 1069.00
IUUC-Mac-065566 Musa acuminata 38.96 2.00e-44 173.00
IUUC-Mpu-066537 Mustela putorius furo 92.48 0.00e+00 1189.00
IUUC-Mlu-067497 Myotis lucifugus 93.05 0.00e+00 1025.00
IUUC-Nfi-068337 Neosartorya fischeri 29.21 4.00e-39 155.00
IUUC-Nle-068971 Nomascus leucogenys 92.48 0.00e+00 983.00
IUUC-Opr-070791 Ochotona princeps 91.19 0.00e+00 901.00
IUUC-Ont-071548 Oreochromis niloticus 50.62 0.00e+00 647.00
IUUC-Oan-072747 Ornithorhynchus anatinus 83.08 0.00e+00 706.00
IUUC-Ocu-074928 Oryctolagus cuniculus 94.74 0.00e+00 787.00
IUUC-Oba-075239 Oryza barthii 41.62 7.00e-42 164.00
IUUC-Obr-076158 Oryza brachyantha 40.57 2.00e-43 170.00
IUUC-Ogu-078154 Oryza glumaepatula 42.13 2.00e-42 166.00
IUUC-Oin-079067 Oryza indica 35.79 3.00e-42 166.00
IUUC-Olo-080663 Oryza longistaminata 41.62 9.00e-42 164.00
IUUC-Oni-082119 Oryza nivara 35.79 2.00e-42 166.00
IUUC-Opu-083266 Oryza punctata 42.86 1.00e-31 130.00
IUUC-Oru-085190 Oryza rufipogon 41.62 9.00e-42 164.00
IUUC-Ola-086977 Oryzias latipes 51.91 0.00e+00 658.00
IUUC-Oga-088719 Otolemur garnettii 82.56 0.00e+00 1125.00
IUUC-Oar-089577 Ovis aries 96.24 0.00e+00 1065.00
IUUC-Ptr-090711 Pan troglodytes 90.30 0.00e+00 1149.00
IUUC-Pan-092587 Papio anubis 85.64 0.00e+00 1126.00
IUUC-Psi-093128 Pelodiscus sinensis 73.69 0.00e+00 845.00
IUUC-Pfo-096474 Poecilia formosa 51.32 0.00e+00 658.00
IUUC-Pab-097800 Pongo abelii 90.09 0.00e+00 1110.00
IUUC-Pop-100044 Populus trichocarpa 33.79 2.00e-43 169.00
IUUC-Ppe-101621 Prunus persica 40.61 3.00e-36 145.00
IUUC-Pgr-103289 Puccinia graminis 26.57 5.00e-26 112.00
IUUC-Rno-105718 Rattus norvegicus 83.92 0.00e+00 1005.00
IUUC-Sit-110495 Setaria italica 41.03 3.00e-41 162.00
IUUC-Sly-111396 Solanum lycopersicum 33.67 4.00e-42 165.00
IUUC-Sar-113220 Sorex araneus 88.89 0.00e+00 733.00
IUUC-Sbi-114779 Sorghum bicolor 39.75 7.00e-29 121.00
IUUC-Tgu-117431 Taeniopygia guttata 69.89 0.00e+00 827.00
IUUC-Tru-118274 Takifugu rubripes 50.70 0.00e+00 628.00
IUUC-Tsy-119043 Tarsius syrichta 92.67 0.00e+00 995.00
IUUC-Tni-120766 Tetraodon nigroviridis 49.85 4.00e-168 584.00
IUUC-Tca-121632 Theobroma cacao 31.76 3.00e-44 172.00
IUUC-Tae-124676 Triticum aestivum 35.27 1.00e-43 170.00
IUUC-Tur-126297 Triticum urartu 41.36 3.00e-32 133.00
IUUC-Tme-127112 Tuber melanosporum 36.73 2.00e-46 179.00
IUUC-Tbe-127284 Tupaia belangeri 90.38 0.00e+00 776.00
IUUC-Vda-129721 Verticillium dahliae 28.53 1.00e-36 147.00
IUUC-Vpa-130408 Vicugna pacos 86.84 0.00e+00 912.00
IUUC-Vvi-130910 Vitis vinifera 32.31 2.00e-38 153.00
IUUC-Xtr-132417 Xenopus tropicalis 58.99 0.00e+00 738.00
IUUC-Xma-134099 Xiphophorus maculatus 51.31 0.00e+00 656.00
IUUC-Zma-135914 Zea mays 41.32 2.00e-24 106.00
Created Date 25-Jun-2017

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