iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050816

Ensembl Protein ID

LPERR03G06360.1

UniProt Accession

A0A0D9VQQ9; A0A0D9VQQ9_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR03G06360	LPERR03G06360.1	LPERR03G06360.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	44.08	3.00e-05	45.10	IUUC-Ath-007127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MRRQEVVVVT ELELRMQLLG GGAACHYNIN DNADLLAEIL ARLDGRSLAA AACVCRLWAA 60
VARRDAVWEA LCLRHVGPPA PAAASSASGH ATRAVVAALG GYRRLYRLCL GPALDRLGRG 120

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Nucleotide Sequence
(Fasta)

ATGCGGCGGC AGGAGGTGGT GGTCGTGACG GAGCTGGAGC TGCGGATGCA GCTGCTCGGC 60
GGCGGCGCGG CATGCCACTA CAACATCAAC GACAACGCCG ACCTCCTGGC CGAGATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0009740--P:gibberellic acid mediated signaling pathway
GO:0009937--P:regulation of gibberellic acid mediated signaling pathway
GO:0048831--P:regulation of shoot system development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	40.85	4.00e-09	53.90
IUUC-Aly-005539	Arabidopsis lyrata	44.74	2.00e-23	100.00
IUUC-Ath-007127	Arabidopsis thaliana	44.08	2.00e-23	100.00
IUUC-Bdi-014290	Brachypodium distachyon	69.88	2.00e-27	114.00
IUUC-Bol-015233	Brassica oleracea	48.03	2.00e-22	97.40
IUUC-Bra-017984	Brassica rapa	48.03	9.00e-24	102.00
IUUC-Gma-043632	Glycine max	48.37	1.00e-22	98.20
IUUC-Mtr-057946	Medicago truncatula	47.71	3.00e-19	87.00
IUUC-Mac-064781	Musa acuminata	42.86	2.00e-09	54.30
IUUC-Ogl-077474	Oryza glaberrima	84.15	9.00e-29	119.00
IUUC-Ogu-079029	Oryza glumaepatula	84.15	9.00e-29	119.00
IUUC-Oin-080121	Oryza indica	84.15	9.00e-29	119.00
IUUC-Ome-081968	Oryza meridionalis	95.00	3.00e-16	75.10
IUUC-Oni-082552	Oryza nivara	84.15	9.00e-29	119.00
IUUC-Opu-083746	Oryza punctata	75.88	2.00e-32	130.00
IUUC-Oru-084658	Oryza rufipogon	84.15	9.00e-29	119.00
IUUC-Osa-086295	Oryza sativa	84.15	9.00e-29	119.00
IUUC-Pop-099566	Populus trichocarpa	51.30	8.00e-20	88.60
IUUC-Ppe-102106	Prunus persica	56.04	3.00e-20	90.50
IUUC-Sly-111364	Solanum lycopersicum	56.52	1.00e-23	101.00
IUUC-Stu-112502	Solanum tuberosum	56.52	1.00e-23	101.00
IUUC-Sbi-114231	Sorghum bicolor	79.22	4.00e-15	73.90
IUUC-Tca-121336	Theobroma cacao	39.29	7.00e-12	62.40
IUUC-Tae-124891	Triticum aestivum	81.82	5.00e-29	119.00
IUUC-Vvi-130926	Vitis vinifera	50.31	2.00e-22	97.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence