iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003191

Ensembl Protein ID

ENSAPLP00000005040.1

UniProt Accession

U3ICR8; U3ICR8_ANAPL

Genbank Protein ID

ENSAPLP00000005040

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01074016

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000005456.1	ENSAPLT00000005667.1	ENSAPLP00000005040.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	38.71	2.00e-31	135.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

VPEPIKTSLS QPQPAGTGTS TSTSTITNSS NGKRASANGQ QPAASRYLPR EVPPRFRQQE 60
QKQLLKRGQP LPPGTLTGTS PAQGTGQAGA SPPPQQGAGG QHHPSKTQAD LSHSGLGDHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCCAGAAC CTATTAAGAC CAGTTTAAGC CAGCCCCAAC CTGCCGGTAC CGGTACCAGT 60
ACTTCCACCA GCACTATTAC CAACAGCAGC AATGGCAAGC GTGCATCTGC TAATGGGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	43.17	0.00e+00	875.00
IUUC-Aca-004717	Anolis carolinensis	89.75	0.00e+00	2641.00
IUUC-Ame-010681	Astyanax mexicanus	50.07	0.00e+00	839.00
IUUC-Bta-012915	Bos taurus	37.85	9.00e-125	441.00
IUUC-Cja-019614	Callithrix jacchus	83.34	0.00e+00	2060.00
IUUC-Cfa-020452	Canis familiaris	38.46	2.00e-135	477.00
IUUC-Cpo-021452	Cavia porcellus	81.69	0.00e+00	2246.00
IUUC-Csa-023169	Chlorocebus sabaeus	42.84	0.00e+00	869.00
IUUC-Cho-024655	Choloepus hoffmanni	43.08	8.00e-131	462.00
IUUC-Dre-028059	Danio rerio	54.13	0.00e+00	1023.00
IUUC-Dno-029734	Dasypus novemcinctus	41.89	0.00e+00	858.00
IUUC-Dor-030671	Dipodomys ordii	46.34	0.00e+00	719.00
IUUC-Dme-032014	Drosophila melanogaster	38.38	1.00e-29	125.00
IUUC-Ete-032774	Echinops telfairi	73.96	0.00e+00	1373.00
IUUC-Eca-033866	Equus caballus	83.51	0.00e+00	2085.00
IUUC-Eeu-034572	Erinaceus europaeus	53.57	5.00e-44	173.00
IUUC-Fal-036856	Ficedula albicollis	92.28	0.00e+00	2233.00
IUUC-Gga-040531	Gallus gallus	91.69	0.00e+00	2595.00
IUUC-Gac-041681	Gasterosteus aculeatus	51.25	0.00e+00	914.00
IUUC-Ggo-045143	Gorilla gorilla	84.27	0.00e+00	2127.00
IUUC-Hsa-045913	Homo sapiens	83.75	0.00e+00	2101.00
IUUC-Lch-049619	Latimeria chalumnae	44.41	0.00e+00	991.00
IUUC-Loc-052289	Lepisosteus oculatus	71.64	0.00e+00	1031.00
IUUC-Laf-053607	Loxodonta africana	83.51	0.00e+00	2421.00
IUUC-Mcc-055342	Macaca mulatta	83.80	0.00e+00	2046.00
IUUC-Meu-056275	Macropus eugenii	48.00	1.00e-155	544.00
IUUC-Mtr-058185	Medicago truncatula	42.22	3.00e-03	36.60
IUUC-Mga-059241	Meleagris gallopavo	43.92	0.00e+00	954.00
IUUC-Mmr-061348	Microcebus murinus	38.25	6.00e-133	469.00
IUUC-Mdo-062155	Monodelphis domestica	83.32	0.00e+00	2513.00
IUUC-Mmu-064259	Mus musculus	46.49	0.00e+00	786.00
IUUC-Mpu-066534	Mustela putorius furo	37.24	2.00e-97	351.00
IUUC-Mlu-067834	Myotis lucifugus	42.47	0.00e+00	895.00
IUUC-Nle-069168	Nomascus leucogenys	42.53	0.00e+00	845.00
IUUC-Opr-070976	Ochotona princeps	38.40	2.00e-83	304.00
IUUC-Ocu-074534	Oryctolagus cuniculus	71.23	0.00e+00	835.00
IUUC-Olo-080743	Oryza longistaminata	28.33	2.00e-02	29.60
IUUC-Oga-088116	Otolemur garnettii	42.71	0.00e+00	871.00
IUUC-Oar-090041	Ovis aries	37.42	7.00e-112	399.00
IUUC-Ptr-091135	Pan troglodytes	86.14	0.00e+00	2074.00
IUUC-Pan-092665	Papio anubis	86.32	0.00e+00	2058.00
IUUC-Psi-093057	Pelodiscus sinensis	86.56	0.00e+00	2300.00
IUUC-Pma-094508	Petromyzon marinus	37.62	5.00e-75	275.00
IUUC-Pfo-097115	Poecilia formosa	57.54	0.00e+00	665.00
IUUC-Pab-097935	Pongo abelii	43.05	0.00e+00	880.00
IUUC-Pca-100481	Procavia capensis	74.76	0.00e+00	900.00
IUUC-Pva-102376	Pteropus vampyrus	45.29	2.00e-67	251.00
IUUC-Rno-105508	Rattus norvegicus	38.74	1.00e-130	461.00
IUUC-Sar-113036	Sorex araneus	60.95	2.00e-44	174.00
IUUC-Sbi-114163	Sorghum bicolor	29.23	4.40e-01	29.60
IUUC-Ssc-115574	Sus scrofa	65.01	0.00e+00	1394.00
IUUC-Tgu-117233	Taeniopygia guttata	91.19	0.00e+00	2328.00
IUUC-Tru-117725	Takifugu rubripes	52.47	0.00e+00	962.00
IUUC-Tsy-118786	Tarsius syrichta	36.58	3.00e-74	273.00
IUUC-Tae-123684	Triticum aestivum	39.47	8.80e-02	31.60
IUUC-Tbe-127989	Tupaia belangeri	76.46	0.00e+00	811.00
IUUC-Ttr-128518	Tursiops truncatus	82.75	0.00e+00	2232.00
IUUC-Vpa-130230	Vicugna pacos	44.82	6.00e-79	290.00
IUUC-Xtr-132265	Xenopus tropicalis	72.13	0.00e+00	1810.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence