iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027575

Ensembl Protein ID

ENSDARP00000098546.3

UniProt Accession

A5PMS4; A5PMS4_DANRE

Genbank Protein ID

ENSDARP00000098546

Protein Name

Rhomboid domain-containing 3

Genbank Nucleotide ID

BX664747

Gene Name

rhbdd3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000079816.3	ENSDART00000111302.3	ENSDARP00000098546.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	59.55	3.00e-19	94.00	IUUC-Hsa-046646
UBD/Alpha-Helix/UBA	34.33	4.00e-17	86.30	IUUC-Mmu-063304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MLNNIFPAWM WSGSNRPGCC SGTFLILSLI VSTWLCGIHA SLSLGPGGEF PGFYDFIFYA 60
FSNEELTSFL HNISLLLWIG PCQERRWGTF TFLTLSFISA LLLPPIYALF LFVTGDEASR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGTCAAAA TAAAAGGGAT GTCAAGTAAC ATCGGCGTTG TTTGGTCTCT TTAATAATTT 60
ACAATTAATA AAATAAATAC GACATAAGTA CAGCTGGTTG TAATTACACT CGTCGTTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR009060--UBA-like

Pfam

PF01694--Rhomboid

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

KEGG

dre:797317

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001619	Ailuropoda melanoleuca	48.78	2.00e-11	63.50
IUUC-Aca-004494	Anolis carolinensis	35.74	2.00e-17	83.20
IUUC-Ame-010805	Astyanax mexicanus	68.03	3.00e-120	424.00
IUUC-Bta-012844	Bos taurus	66.67	2.00e-14	73.20
IUUC-Cja-019853	Callithrix jacchus	57.78	4.00e-13	69.30
IUUC-Cfa-021026	Canis familiaris	60.76	6.00e-20	91.70
IUUC-Csa-023360	Chlorocebus sabaeus	63.10	5.00e-21	95.50
IUUC-Cme-027293	Cyanidioschyzon merolae	42.11	7.60e-02	32.00
IUUC-Dno-029113	Dasypus novemcinctus	61.36	3.00e-15	76.30
IUUC-Eca-034158	Equus caballus	58.62	2.00e-21	96.70
IUUC-Eeu-034983	Erinaceus europaeus	54.65	8.00e-19	86.70
IUUC-Fca-035531	Felis catus	60.76	2.00e-20	93.60
IUUC-Ggo-045015	Gorilla gorilla	59.55	3.00e-20	92.80
IUUC-Hsa-046646	Homo sapiens	59.55	3.00e-20	92.80
IUUC-Itr-048164	Ictidomys tridecemlineatus	60.24	3.00e-20	92.80
IUUC-Lch-049560	Latimeria chalumnae	33.51	3.00e-17	82.80
IUUC-Lpe-051525	Leersia perrieri	24.92	1.00e-03	37.70
IUUC-Loc-052194	Lepisosteus oculatus	39.37	6.00e-26	111.00
IUUC-Laf-054308	Loxodonta africana	63.10	3.00e-22	99.40
IUUC-Mcc-055034	Macaca mulatta	63.10	3.00e-21	95.90
IUUC-Meu-056317	Macropus eugenii	51.11	3.00e-10	59.30
IUUC-Mdo-062745	Monodelphis domestica	51.55	2.00e-21	96.70
IUUC-Mmu-063304	Mus musculus	54.65	4.00e-18	85.90
IUUC-Mpu-066394	Mustela putorius furo	58.97	6.00e-19	88.60
IUUC-Mlu-067595	Myotis lucifugus	59.49	5.00e-19	89.00
IUUC-Nle-069211	Nomascus leucogenys	64.94	3.00e-20	92.80
IUUC-Opr-070249	Ochotona princeps	56.32	8.00e-20	90.10
IUUC-Ocu-074418	Oryctolagus cuniculus	55.68	8.00e-20	91.30
IUUC-Obr-076568	Oryza brachyantha	23.35	1.30e-02	34.70
IUUC-Ola-087450	Oryzias latipes	53.37	2.00e-41	161.00
IUUC-Oga-088214	Otolemur garnettii	61.90	8.00e-21	94.70
IUUC-Oar-089324	Ovis aries	59.46	2.00e-08	53.10
IUUC-Ptr-091322	Pan troglodytes	57.30	2.00e-19	89.70
IUUC-Pan-092490	Papio anubis	63.10	5.00e-21	95.50
IUUC-Pfo-097125	Poecilia formosa	51.50	4.00e-44	171.00
IUUC-Pva-102615	Pteropus vampyrus	59.49	2.00e-19	90.50
IUUC-Rno-105844	Rattus norvegicus	54.88	9.00e-18	84.70
IUUC-Sha-107118	Sarcophilus harrisii	34.92	9.00e-12	63.90
IUUC-Sit-110586	Setaria italica	23.72	5.00e-05	42.40
IUUC-Sbi-114163	Sorghum bicolor	27.14	9.00e-02	32.70
IUUC-Ssc-115786	Sus scrofa	62.03	1.00e-20	94.00
IUUC-Ttr-128407	Tursiops truncatus	59.49	2.00e-11	63.50
IUUC-Xtr-131878	Xenopus tropicalis	53.33	1.00e-15	77.40
IUUC-Xma-133198	Xiphophorus maculatus	50.84	4.00e-75	275.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence