iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095384

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544963

Gene Name

PHYPADRAFT_184479

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S74_81V6	PP1S74_81V6.1	PP1S74_81V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.1	335	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e++ +  + lpC H+fh+ Cl  w  l +    + +CP+Cr
   Q: 335  CAICKEPMAR-AKRLPCAHLFHLPCLRSW--LDQGLAETYSCPTCR 377
           **********.899***************..888899********8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGVGYGPVVA LYTALSLSGI AWKLNSALRS TFDKDLQGLD PIEADRTLQA LLQSSVVVAL 60
LANLMVNCFL LITLSMKTIF FGQLSLVETQ KVVERLINYV LFKGLFLTWV VRPEMMQIAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGTAG GTTATGGGCC AGTAGTTGCA CTATATACCG CTTTAAGTCT AAGCGGGATC 60
GCTTGGAAAC TTAATTCAGC TCTGCGGAGC ACTTTCGACA AGGACTTGCA AGGCCTGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_184479

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogu-078481	Oryza glumaepatula	35.49	2.00e-68	252.00
IUUC-Olo-080588	Oryza longistaminata	52.27	9.00e-41	159.00
IUUC-Opu-083500	Oryza punctata	40.00	6.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence