iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017564

Ensembl Protein ID

Bra017935.1-P

UniProt Accession

M4DN48; M4DN48_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra017935	Bra017935.1	Bra017935.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-20	72.0	625	659

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           +++++la+s+ +++ sGs+D+tik W+l +g+l++
   Q: 625  SGIHALAYSEdGYVYSGSGDNTIKAWSLQDGKLVC 659
           46999999555********************9987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEPPECPVCL QSYDGESTLP RVLSCGHTAC EECLTNIPKK FPDTIRCPAC TVLVKFPPQG 60
PSALPKNIDL LRLFPSSSNP TPDSTRNSKN SSFEFVTRSW PDEFHAAWKD RVLLLDVSVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCCAC CGGAGTGTCC GGTGTGTCTA CAATCATACG ACGGCGAATC CACACTTCCG 60
CGCGTGCTCT CCTGCGGCCA CACGGCGTGC GAAGAATGTC TGACGAACAT CCCCAAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	30.08	3.00e-71	262.00
IUUC-Atr-003105	Amborella trichopoda	37.33	1.00e-135	477.00
IUUC-Aly-006480	Arabidopsis lyrata	68.52	0.00e+00	999.00
IUUC-Ath-007304	Arabidopsis thaliana	73.72	0.00e+00	1183.00
IUUC-Bdi-015002	Brachypodium distachyon	36.24	2.00e-102	366.00
IUUC-Bol-015912	Brassica oleracea	90.38	0.00e+00	1360.00
IUUC-Gma-043879	Glycine max	43.54	0.00e+00	641.00
IUUC-Hvu-047671	Hordeum vulgare	35.84	5.00e-108	384.00
IUUC-Lpe-051223	Leersia perrieri	35.31	5.00e-96	345.00
IUUC-Mtr-058342	Medicago truncatula	61.31	1.00e-98	352.00
IUUC-Mac-065113	Musa acuminata	37.01	9.00e-139	487.00
IUUC-Oba-075807	Oryza barthii	35.99	2.00e-105	376.00
IUUC-Obr-076101	Oryza brachyantha	36.48	2.00e-105	376.00
IUUC-Ogl-077321	Oryza glaberrima	35.17	2.00e-103	370.00
IUUC-Ogu-078456	Oryza glumaepatula	36.48	5.00e-102	365.00
IUUC-Oin-079822	Oryza indica	36.15	1.00e-105	377.00
IUUC-Olo-080336	Oryza longistaminata	37.56	3.00e-98	352.00
IUUC-Ome-081976	Oryza meridionalis	36.81	3.00e-104	372.00
IUUC-Oni-082359	Oryza nivara	35.96	4.00e-105	375.00
IUUC-Opu-083757	Oryza punctata	35.48	3.00e-101	362.00
IUUC-Oru-085207	Oryza rufipogon	36.06	3.00e-105	375.00
IUUC-Osa-085546	Oryza sativa	31.89	6.00e-56	212.00
IUUC-Ppa-095665	Physcomitrella patens	39.80	1.00e-54	207.00
IUUC-Pop-098862	Populus trichocarpa	47.81	0.00e+00	731.00
IUUC-Ppe-101295	Prunus persica	45.74	0.00e+00	667.00
IUUC-Smo-109481	Selaginella moellendorffii	36.14	7.00e-46	179.00
IUUC-Sit-110599	Setaria italica	36.19	3.00e-105	375.00
IUUC-Sly-111867	Solanum lycopersicum	53.71	2.00e-105	375.00
IUUC-Stu-112296	Solanum tuberosum	41.54	3.00e-177	615.00
IUUC-Sbi-114828	Sorghum bicolor	35.20	2.00e-110	393.00
IUUC-Tca-121601	Theobroma cacao	48.37	0.00e+00	740.00
IUUC-Tae-125330	Triticum aestivum	35.66	1.00e-110	394.00
IUUC-Tur-126303	Triticum urartu	37.84	2.00e-106	379.00
IUUC-Vvi-130947	Vitis vinifera	47.45	0.00e+00	741.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence