iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-044715

Ensembl Protein ID

ENSGGOP00000028101.1

UniProt Accession

G3SJ11; G3SJ11_GORGO

Protein Name

Uncharacterized protein

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000025560.1	ENSGGOT00000032645.1	ENSGGOP00000028101.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-08	34.6	195	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 195  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLT 232
           78999*******************************97 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MLRLQMTDGH ISCTAVEFSY MSKISLNTPP GTKVKLSGIV DIKNGFLLLN DSNTTVLGGE 60
VEHLIEKWEL QRSLSKHNRS NIGTEGGPPP FVPFGQKCVS HVQVDSRELD RRKTLQVTMP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCTCGAA GGTCCATGTG TTTTGCAAAT TCAAAAAATT CGCAATGTTG CTGCACCAAA 60
GGATAATGAA GAATCTCAGG CTGCACCAAG GATGCTGCGA TTACAGATGA CTGATGGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	33.68	3.00e-12	65.90
IUUC-Aml-001751	Ailuropoda melanoleuca	90.69	0.00e+00	1146.00
IUUC-Atr-002788	Amborella trichopoda	34.74	1.00e-12	67.80
IUUC-Apl-004055	Anas platyrhynchos	74.20	0.00e+00	882.00
IUUC-Aca-004367	Anolis carolinensis	70.49	0.00e+00	857.00
IUUC-Aly-006072	Arabidopsis lyrata	36.27	2.00e-14	73.60
IUUC-Ath-007491	Arabidopsis thaliana	35.29	5.00e-14	72.40
IUUC-Ame-011439	Astyanax mexicanus	47.37	3.00e-126	446.00
IUUC-Bta-012894	Bos taurus	90.20	0.00e+00	1158.00
IUUC-Bdi-014462	Brachypodium distachyon	34.38	3.00e-13	69.70
IUUC-Bol-015343	Brassica oleracea	39.18	3.00e-14	73.20
IUUC-Bra-016787	Brassica rapa	36.45	1.00e-14	73.90
IUUC-Cel-018154	Caenorhabditis elegans	32.26	5.00e-18	86.30
IUUC-Cja-019364	Callithrix jacchus	94.18	0.00e+00	1190.00
IUUC-Cfa-021166	Canis familiaris	89.33	0.00e+00	1111.00
IUUC-Cpo-021678	Cavia porcellus	81.95	0.00e+00	956.00
IUUC-Csa-023299	Chlorocebus sabaeus	96.48	0.00e+00	1260.00
IUUC-Cho-024694	Choloepus hoffmanni	94.12	5.00e-138	484.00
IUUC-Cin-025191	Ciona intestinalis	39.72	2.00e-22	99.40
IUUC-Csv-026348	Ciona savignyi	52.94	2.00e-12	63.90
IUUC-Dre-028715	Danio rerio	47.76	1.00e-138	486.00
IUUC-Dno-030091	Dasypus novemcinctus	87.75	0.00e+00	1135.00
IUUC-Dor-030807	Dipodomys ordii	79.33	0.00e+00	978.00
IUUC-Dse-031459	Dothistroma septosporum	23.83	8.00e-03	35.80
IUUC-Dme-031770	Drosophila melanogaster	28.52	2.00e-19	91.70
IUUC-Ete-032507	Echinops telfairi	66.67	0.00e+00	682.00
IUUC-Eca-033406	Equus caballus	89.93	0.00e+00	1023.00
IUUC-Eeu-034600	Erinaceus europaeus	80.40	0.00e+00	964.00
IUUC-Fca-035916	Felis catus	90.51	0.00e+00	1143.00
IUUC-Fal-036658	Ficedula albicollis	72.67	0.00e+00	840.00
IUUC-Gmo-038974	Gadus morhua	56.17	2.00e-71	263.00
IUUC-Gga-040195	Gallus gallus	73.28	0.00e+00	895.00
IUUC-Gac-042537	Gasterosteus aculeatus	44.75	2.00e-126	446.00
IUUC-Gma-044234	Glycine max	43.43	1.00e-17	84.30
IUUC-Hsa-045814	Homo sapiens	98.77	0.00e+00	1292.00
IUUC-Hvu-047365	Hordeum vulgare	34.38	2.00e-12	67.00
IUUC-Itr-047866	Ictidomys tridecemlineatus	89.43	0.00e+00	1140.00
IUUC-Lch-050393	Latimeria chalumnae	59.30	0.00e+00	670.00
IUUC-Lpe-050691	Leersia perrieri	34.38	6.00e-14	72.00
IUUC-Loc-052859	Lepisosteus oculatus	55.66	1.00e-162	566.00
IUUC-Laf-053953	Loxodonta africana	87.20	0.00e+00	850.00
IUUC-Mcc-055846	Macaca mulatta	96.17	0.00e+00	1257.00
IUUC-Meu-056790	Macropus eugenii	69.42	0.00e+00	852.00
IUUC-Mtr-058749	Medicago truncatula	41.76	6.00e-15	75.10
IUUC-Mla-058959	Melampsora laricipopulina	38.46	3.00e-06	45.80
IUUC-Mga-059656	Meleagris gallopavo	72.67	0.00e+00	832.00
IUUC-Mmr-061089	Microcebus murinus	90.02	0.00e+00	1094.00
IUUC-Mdo-063043	Monodelphis domestica	68.56	0.00e+00	741.00
IUUC-Mmu-063654	Mus musculus	83.61	0.00e+00	1011.00
IUUC-Mac-064947	Musa acuminata	40.82	2.00e-10	60.50
IUUC-Mpu-066115	Mustela putorius furo	90.24	0.00e+00	1042.00
IUUC-Mlu-066974	Myotis lucifugus	88.62	0.00e+00	1077.00
IUUC-Nle-069184	Nomascus leucogenys	97.40	0.00e+00	1271.00
IUUC-Opr-070770	Ochotona princeps	80.70	0.00e+00	1016.00
IUUC-Ont-072040	Oreochromis niloticus	58.47	1.00e-101	363.00
IUUC-Oan-073448	Ornithorhynchus anatinus	80.00	3.00e-67	247.00
IUUC-Ocu-074405	Oryctolagus cuniculus	91.73	0.00e+00	1150.00
IUUC-Oba-075977	Oryza barthii	34.38	5.00e-08	52.00
IUUC-Obr-076298	Oryza brachyantha	36.46	1.00e-13	71.20
IUUC-Ogl-077706	Oryza glaberrima	35.42	3.00e-08	52.80
IUUC-Ogu-078381	Oryza glumaepatula	34.38	2.00e-08	53.50
IUUC-Oin-080150	Oryza indica	35.42	3.00e-08	52.80
IUUC-Ome-081153	Oryza meridionalis	34.38	9.00e-08	51.20
IUUC-Oni-083115	Oryza nivara	34.38	7.00e-08	51.60
IUUC-Opu-083860	Oryza punctata	34.38	2.00e-12	67.00
IUUC-Oru-084859	Oryza rufipogon	35.42	4.00e-08	52.80
IUUC-Osa-085567	Oryza sativa	35.42	8.00e-07	48.10
IUUC-Ola-087049	Oryzias latipes	46.26	6.00e-133	468.00
IUUC-Oga-088455	Otolemur garnettii	90.96	0.00e+00	1164.00
IUUC-Oar-090096	Ovis aries	88.97	0.00e+00	1146.00
IUUC-Ptr-090974	Pan troglodytes	98.01	0.00e+00	1296.00
IUUC-Pan-092657	Papio anubis	96.17	0.00e+00	1258.00
IUUC-Psi-093113	Pelodiscus sinensis	74.96	0.00e+00	930.00
IUUC-Ppa-095466	Physcomitrella patens	41.30	1.00e-15	77.40
IUUC-Pfo-096631	Poecilia formosa	45.61	2.00e-129	456.00
IUUC-Pab-098070	Pongo abelii	98.16	0.00e+00	1283.00
IUUC-Pop-099235	Populus trichocarpa	37.50	4.00e-14	72.80
IUUC-Pca-101032	Procavia capensis	84.33	6.00e-180	624.00
IUUC-Ppe-101793	Prunus persica	39.58	5.00e-16	78.60
IUUC-Pva-102290	Pteropus vampyrus	88.97	0.00e+00	1151.00
IUUC-Rno-105080	Rattus norvegicus	83.15	0.00e+00	986.00
IUUC-Sce-106191	Saccharomyces cerevisiae	40.00	3.00e-03	37.00
IUUC-Sha-107598	Sarcophilus harrisii	77.17	0.00e+00	967.00
IUUC-Sit-110735	Setaria italica	36.46	1.00e-13	70.90
IUUC-Sly-111126	Solanum lycopersicum	40.86	2.00e-14	73.60
IUUC-Stu-112780	Solanum tuberosum	41.67	1.00e-16	80.90
IUUC-Sar-113418	Sorex araneus	86.54	0.00e+00	1076.00
IUUC-Sbi-113925	Sorghum bicolor	36.46	2.00e-13	69.70
IUUC-Sre-114917	Sporisorium reilianum	37.80	9.00e-07	48.10
IUUC-Ssc-115712	Sus scrofa	90.52	0.00e+00	1164.00
IUUC-Tgu-117148	Taeniopygia guttata	72.56	0.00e+00	878.00
IUUC-Tru-117831	Takifugu rubripes	44.24	6.00e-128	451.00
IUUC-Tsy-118917	Tarsius syrichta	90.05	0.00e+00	1108.00
IUUC-Tni-120783	Tetraodon nigroviridis	54.62	2.00e-95	343.00
IUUC-Tca-121430	Theobroma cacao	45.31	1.00e-06	47.80
IUUC-Tae-123752	Triticum aestivum	33.68	2.00e-12	66.60
IUUC-Tur-126238	Triticum urartu	35.42	4.00e-12	65.50
IUUC-Ttr-128615	Tursiops truncatus	84.51	0.00e+00	1061.00
IUUC-Vpa-130531	Vicugna pacos	90.66	0.00e+00	1174.00
IUUC-Vvi-131607	Vitis vinifera	43.96	9.00e-14	71.20
IUUC-Xtr-132787	Xenopus tropicalis	57.04	0.00e+00	645.00
IUUC-Xma-133815	Xiphophorus maculatus	45.56	2.00e-131	462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence