iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058746

Ensembl Protein ID

KEH31849

UniProt Accession

A0A072UPV9; A0A072UPV9_MEDTR

Genbank Protein ID

KEH31849.1

Protein Name

RING-finger ubiquitin ligase

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g106960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g106960	KEH31849	KEH31849

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.5	235	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+  w       + + +CP Cr
   Q: 235  CPICLEEFrvGNEVRGLPCAHNFHVECIDEW------LRLNVKCPRCR 276
           ********88666******************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAIRGVDFKW YDGFFLSMLA TSVVIVAINW KRYHSCTYPL HIWIVVDYTA VFVFRLLMFV 60
DNGFAAGMGL DFGWQQRYAR FCGRVVVLSI LGLLLYPFLW AWTIIGTMWF SSAKSCLPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCGCGTGT TTTGTTACTT CATCCTCTCT CTCTCTCTCA TACACACACT TGTGCTGTGT 60
GTTGTGTCAC TCTTGTTCGC TTTTTCTATT ACCGTGTTCC TGCTTTATTC ATCATCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	85.14	2.00e-154	538.00
IUUC-Atr-002648	Amborella trichopoda	82.67	2.00e-161	560.00
IUUC-Aly-006490	Arabidopsis lyrata	75.96	2.00e-162	564.00
IUUC-Ath-007655	Arabidopsis thaliana	75.41	2.00e-162	563.00
IUUC-Bdi-014759	Brachypodium distachyon	77.97	3.00e-146	510.00
IUUC-Bol-015136	Brassica oleracea	74.86	1.00e-158	551.00
IUUC-Bra-018024	Brassica rapa	71.70	3.00e-150	523.00
IUUC-Fox-037731	Fusarium oxysporum	46.03	4.00e-11	60.50
IUUC-Gma-042879	Glycine max	88.89	0.00e+00	707.00
IUUC-Hvu-047589	Hordeum vulgare	82.99	3.00e-69	253.00
IUUC-Kpa-049389	Komagataella pastoris	38.18	5.00e-10	57.80
IUUC-Lpe-051403	Leersia perrieri	70.13	4.00e-111	393.00
IUUC-Lma-053136	Leptosphaeria maculans	48.21	5.00e-12	62.40
IUUC-Mac-064833	Musa acuminata	84.77	5.00e-171	592.00
IUUC-Oba-075099	Oryza barthii	82.72	2.00e-157	548.00
IUUC-Obr-076541	Oryza brachyantha	75.26	6.00e-160	556.00
IUUC-Ogl-077544	Oryza glaberrima	83.33	3.00e-157	547.00
IUUC-Ogu-078123	Oryza glumaepatula	78.09	3.00e-144	503.00
IUUC-Oin-079313	Oryza indica	82.80	2.00e-151	528.00
IUUC-Olo-080383	Oryza longistaminata	60.00	3.00e-99	354.00
IUUC-Ome-081106	Oryza meridionalis	71.43	2.00e-119	421.00
IUUC-Oni-082730	Oryza nivara	83.43	1.00e-161	561.00
IUUC-Opu-083224	Oryza punctata	78.02	6.00e-159	553.00
IUUC-Oru-085150	Oryza rufipogon	83.58	7.00e-131	459.00
IUUC-Osa-086306	Oryza sativa	83.02	2.00e-157	548.00
IUUC-Ppa-095217	Physcomitrella patens	50.00	2.00e-77	281.00
IUUC-Pop-099421	Populus trichocarpa	82.40	1.00e-164	572.00
IUUC-Ppe-101399	Prunus persica	79.94	4.00e-155	539.00
IUUC-Ssl-108585	Sclerotinia sclerotiorum	48.28	3.00e-10	59.70
IUUC-Smo-109501	Selaginella moellendorffii	68.49	2.00e-121	427.00
IUUC-Sit-109685	Setaria italica	80.65	1.00e-158	551.00
IUUC-Sly-111730	Solanum lycopersicum	84.66	1.00e-179	621.00
IUUC-Stu-112358	Solanum tuberosum	81.72	2.00e-180	624.00
IUUC-Sbi-114646	Sorghum bicolor	80.06	5.00e-157	546.00
IUUC-Tca-121643	Theobroma cacao	88.06	0.00e+00	646.00
IUUC-Tae-124899	Triticum aestivum	80.47	2.00e-157	547.00
IUUC-Tur-126639	Triticum urartu	84.62	1.00e-125	443.00
IUUC-Vvi-131627	Vitis vinifera	75.54	1.00e-170	592.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence