iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007142

UUCD1 version

UUC-ArT-00930

Ensembl Protein ID

AT1G49780.1

UniProt Accession

Q9FXA4; Q8GXA0; PUB26_ARATH

Genbank Protein ID

AAG13057.1; AEE32475.1; BAC42960.1; ABI93922.1

Protein Name

U-box domain-containing protein 26; Plant U-box protein 26; RING-type E3 ubiquitin transferase PUB26

Genbank Nucleotide ID

AC011807; CP002684; AK118346; BT029013

Gene Name

PUB26; At1g49780; F14J22.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G49780	AT1G49780.1	AT1G49780.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-33	114.8	13	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p +f+CpIsl+lM+dPv++++G+tydr+sI  w+a g++tcPvtr  l++ +l+Pn+tlrrliq+wc +n+s
   Q: 13   QIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLRRLIQEWCVANRS 86
           5899******************************************************************9986 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MPGNLEPLDL GIQIPYHFRC PISLDLMSDP VTISTGQTYD RTSIDSWIAM GNTTCPVTRV 60
ALSDFTLIPN HTLRRLIQEW CVANRSNGVE RIPTPKQPAD PISVRSLLSQ ASAITGTHVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTGATTTA ACACAATCTG TTTACTCTCT CAAAATTAAT TCAGATCATA TAGTATTATT 60
TTGAATTTAA TTTGAACTAA GCAACAAAGT TATAAAAGCC ACACGTGTGG CGCATAGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT1G49780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	44.42	7.00e-70	257.00
IUUC-Aly-005606	Arabidopsis lyrata	98.34	0.00e+00	714.00
IUUC-Bol-015328	Brassica oleracea	86.29	0.00e+00	625.00
IUUC-Bra-017765	Brassica rapa	88.89	0.00e+00	652.00
IUUC-Gma-044197	Glycine max	65.72	7.00e-149	519.00
IUUC-Lpe-050781	Leersia perrieri	59.76	1.00e-51	196.00
IUUC-Mtr-058307	Medicago truncatula	65.13	1.00e-135	475.00
IUUC-Mac-064526	Musa acuminata	46.23	7.00e-56	210.00
IUUC-Ogl-077566	Oryza glaberrima	59.04	2.00e-48	185.00
IUUC-Ogu-078818	Oryza glumaepatula	59.04	4.00e-48	184.00
IUUC-Oni-082172	Oryza nivara	59.04	3.00e-48	185.00
IUUC-Opu-083930	Oryza punctata	60.71	1.00e-51	196.00
IUUC-Oru-084509	Oryza rufipogon	59.04	3.00e-48	185.00
IUUC-Osa-085902	Oryza sativa	59.04	3.00e-48	185.00
IUUC-Pop-100012	Populus trichocarpa	67.77	2.00e-147	514.00
IUUC-Smo-108904	Selaginella moellendorffii	44.88	4.00e-71	261.00
IUUC-Sbi-114366	Sorghum bicolor	59.39	2.00e-51	195.00
IUUC-Tca-121177	Theobroma cacao	67.54	2.00e-159	555.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence