iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002952

Ensembl Protein ID

ERN08695

UniProt Accession

W1PNG6; W1PNG6_AMBTC

Genbank Protein ID

ERN08695.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI393256

Gene Name

AMTR_s00017p00223570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00017p00223570	ERN08695	ERN08695

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.80e-37	125.5	16	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++p++f+CpIslelMrdPv++++G+tydr+sIe w+a+g+ tcPvtrqpl++++l+Pn+tlrrliq+wc +n 
   Q: 16   QIPHHFRCPISLELMRDPVTVSTGQTYDRASIESWVATGHATCPVTRQPLQDQTLIPNHTLRRLIQEWCVANH 88
           69*******************************************************************9885 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MPGSVPVAPL EVRALQIPHH FRCPISLELM RDPVTVSTGQ TYDRASIESW VATGHATCPV 60
TRQPLQDQTL IPNHTLRRLI QEWCVANHAL GVERIPTPKQ PADPTLIRAI LAQAESASSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAGGCA GCGTCCCCGT CGCCCCGCTT GAGGTGCGCG CGCTCCAGAT CCCGCACCAC 60
TTCAGGTGCC CCATATCTTT AGAGCTCATG CGTGACCCCG TCACTGTGAG CACAGGCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18436829

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	45.48	5.00e-72	263.00
IUUC-Aly-005606	Arabidopsis lyrata	51.52	2.00e-110	390.00
IUUC-Ath-006933	Arabidopsis thaliana	53.41	3.00e-100	357.00
IUUC-Bdi-014994	Brachypodium distachyon	79.28	6.00e-50	190.00
IUUC-Bol-015539	Brassica oleracea	53.27	2.00e-99	354.00
IUUC-Bra-017123	Brassica rapa	53.50	1.00e-99	355.00
IUUC-Gma-043153	Glycine max	57.24	6.00e-129	452.00
IUUC-Hvu-047378	Hordeum vulgare	45.60	7.00e-73	266.00
IUUC-Lpe-050781	Leersia perrieri	79.28	3.00e-50	190.00
IUUC-Mtr-058307	Medicago truncatula	57.52	2.00e-114	404.00
IUUC-Mac-065232	Musa acuminata	51.23	2.00e-59	221.00
IUUC-Oba-075168	Oryza barthii	77.68	1.00e-47	181.00
IUUC-Obr-076528	Oryza brachyantha	77.78	7.00e-47	179.00
IUUC-Ogl-077566	Oryza glaberrima	77.68	6.00e-48	183.00
IUUC-Ogu-078818	Oryza glumaepatula	77.68	6.00e-48	182.00
IUUC-Oin-079962	Oryza indica	77.68	6.00e-46	180.00
IUUC-Oni-082172	Oryza nivara	77.68	5.00e-48	183.00
IUUC-Opu-083930	Oryza punctata	80.18	3.00e-50	191.00
IUUC-Oru-084509	Oryza rufipogon	77.68	5.00e-48	183.00
IUUC-Osa-085902	Oryza sativa	77.68	5.00e-48	183.00
IUUC-Pop-100012	Populus trichocarpa	58.82	3.00e-123	433.00
IUUC-Ppe-101571	Prunus persica	58.45	2.00e-112	397.00
IUUC-Smo-108904	Selaginella moellendorffii	47.74	3.00e-77	281.00
IUUC-Sit-110186	Setaria italica	77.48	4.00e-49	187.00
IUUC-Sly-111810	Solanum lycopersicum	57.18	1.00e-122	431.00
IUUC-Stu-112274	Solanum tuberosum	58.12	2.00e-124	437.00
IUUC-Sbi-114366	Sorghum bicolor	77.48	5.00e-50	190.00
IUUC-Tca-121177	Theobroma cacao	58.12	2.00e-137	481.00
IUUC-Tae-123086	Triticum aestivum	45.48	5.00e-72	263.00
IUUC-Tur-126112	Triticum urartu	45.48	4.00e-72	263.00
IUUC-Vvi-131329	Vitis vinifera	58.35	2.00e-118	417.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence