iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108904

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB26

Genbank Nucleotide ID

GL377588

Gene Name

PUB26-1; SELMODRAFT_54896

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_54896	EFJ25090	EFJ25090

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-36	124.3	13	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +vp++f+CpIslelMrdPv++++G+tydrssIekw+++g+ tcP t+q+lt+ +l+Pn+tlrrliq+wc +n+s
   Q: 13   QVPHYFRCPISLELMRDPVTVATGQTYDRSSIEKWVSDGNATCPATMQRLTDLTLIPNHTLRRLIQEWCVANRS 86
           69********************************************************************9986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MPGLKKMQVQ NLQVPHYFRC PISLELMRDP VTVATGQTYD RSSIEKWVSD GNATCPATMQ 60
RLTDLTLIPN HTLRRLIQEW CVANRSRGIE RIPTPKQPAD PQRVAALVRD VTRGTAGGTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGGGC TCAAGAAGAT GCAGGTCCAA AATCTGCAAG TGCCCCACTA CTTCCGGTGC 60
CCGATATCGC TGGAGCTGAT GCGCGACCCG GTGACGGTGG CCACGGGCCA GACGTATGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_54896

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	46.06	4.00e-64	237.00
IUUC-Atr-002952	Amborella trichopoda	48.36	2.00e-64	239.00
IUUC-Aly-005606	Arabidopsis lyrata	46.72	8.00e-73	266.00
IUUC-Ath-007142	Arabidopsis thaliana	46.72	5.00e-73	267.00
IUUC-Bdi-014994	Brachypodium distachyon	45.20	5.00e-55	207.00
IUUC-Bol-015539	Brassica oleracea	47.11	3.00e-63	234.00
IUUC-Bra-017123	Brassica rapa	47.11	7.00e-63	233.00
IUUC-Gma-044197	Glycine max	51.47	7.00e-88	316.00
IUUC-Hvu-047378	Hordeum vulgare	45.55	1.00e-63	236.00
IUUC-Lpe-050781	Leersia perrieri	65.75	3.00e-46	177.00
IUUC-Mtr-058307	Medicago truncatula	49.75	3.00e-77	281.00
IUUC-Oba-075168	Oryza barthii	69.90	4.00e-40	156.00
IUUC-Obr-076528	Oryza brachyantha	73.33	1.00e-42	166.00
IUUC-Oni-082172	Oryza nivara	69.90	2.00e-40	158.00
IUUC-Opu-083930	Oryza punctata	73.53	2.00e-43	169.00
IUUC-Oru-084509	Oryza rufipogon	69.90	2.00e-40	158.00
IUUC-Osa-085902	Oryza sativa	69.90	2.00e-40	158.00
IUUC-Pop-099142	Populus trichocarpa	49.75	3.00e-79	288.00
IUUC-Ppe-101571	Prunus persica	48.53	1.00e-70	259.00
IUUC-Sit-110186	Setaria italica	73.53	7.00e-43	167.00
IUUC-Sly-111810	Solanum lycopersicum	48.74	2.00e-75	275.00
IUUC-Stu-112274	Solanum tuberosum	48.17	9.00e-76	276.00
IUUC-Sbi-114366	Sorghum bicolor	63.33	4.00e-44	171.00
IUUC-Tca-121177	Theobroma cacao	48.05	8.00e-89	319.00
IUUC-Tae-123086	Triticum aestivum	46.06	4.00e-64	237.00
IUUC-Tur-126112	Triticum urartu	46.06	8.00e-65	239.00
IUUC-Vvi-131329	Vitis vinifera	48.29	2.00e-74	271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence