iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121328

Ensembl Protein ID

EOY01099

UniProt Accession

A0A061EFM2; A0A061EFM2_THECC

Genbank Protein ID

EOY01099.1

Protein Name

Zinc finger, C3HC4 type (RING finger) family protein isoform 1

Genbank Nucleotide ID

CM001880

Gene Name

TCM_011052

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_011052	EOY01100	EOY01100
TCM_011052	EOY01099	EOY01099

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-08	35.9	310	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  ++ lpC+H+fh  C+ kw       + +++CPlC+
   Q: 310  CCICLSSYEDGadLHALPCNHHFHSACIVKW------LKMNATCPLCK 351
           ********77777******************......**********7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSTSLSETT TVASDSHAPL LRPRQPDASA ARPATLALLL GRATGRRGAS MLVRETAARE 60
LEERRADWGY SKPVVALDML WNTAFVAVSV AMLICTVDER TNTPIRLWIC GYALQCLVHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAATAGACT TTTGGTTTTG GGGGCTAATA AAAGTTCAAT TATGCCCATT TGCTCATTCT 60
AAAATCTAAA CCCCACAGAA AATTAGAAAT TTAAACCCGA AATCAAATTC CCACATGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006309	Arabidopsis lyrata	71.47	9.00e-125	438.00
IUUC-Ath-007135	Arabidopsis thaliana	71.78	1.00e-125	441.00
IUUC-Bdi-014419	Brachypodium distachyon	58.84	4.00e-72	264.00
IUUC-Bol-015503	Brassica oleracea	68.83	1.00e-105	375.00
IUUC-Bra-017341	Brassica rapa	67.90	6.00e-107	379.00
IUUC-Gma-042852	Glycine max	76.15	5.00e-116	409.00
IUUC-Lpe-050934	Leersia perrieri	60.45	1.00e-95	342.00
IUUC-Mtr-058387	Medicago truncatula	75.29	5.00e-108	383.00
IUUC-Mac-064512	Musa acuminata	65.22	7.00e-105	372.00
IUUC-Oba-075784	Oryza barthii	64.09	2.00e-78	284.00
IUUC-Obr-076831	Oryza brachyantha	61.36	6.00e-78	282.00
IUUC-Ogu-077960	Oryza glumaepatula	54.95	8.00e-88	316.00
IUUC-Oin-079107	Oryza indica	53.73	2.00e-84	305.00
IUUC-Olo-080835	Oryza longistaminata	52.21	2.00e-68	251.00
IUUC-Ome-081564	Oryza meridionalis	63.04	1.00e-95	342.00
IUUC-Oni-082731	Oryza nivara	55.26	2.00e-88	318.00
IUUC-Opu-083749	Oryza punctata	63.23	2.00e-90	324.00
IUUC-Oru-084835	Oryza rufipogon	55.26	2.00e-88	318.00
IUUC-Pop-098913	Populus trichocarpa	76.79	3.00e-124	437.00
IUUC-Ppe-101978	Prunus persica	73.74	2.00e-127	447.00
IUUC-Sit-110199	Setaria italica	60.58	3.00e-89	320.00
IUUC-Sly-110887	Solanum lycopersicum	73.86	3.00e-121	427.00
IUUC-Stu-112563	Solanum tuberosum	76.14	5.00e-126	442.00
IUUC-Sbi-114428	Sorghum bicolor	58.84	5.00e-86	310.00
IUUC-Tae-125157	Triticum aestivum	60.77	2.00e-78	285.00
IUUC-Vvi-131438	Vitis vinifera	47.80	3.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence