iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111102

Ensembl Protein ID

Solyc02g078320.1.1

UniProt Accession

K4B956; K4B956_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g078320.1	Solyc02g078320.1.1	Solyc02g078320.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-08	33.8	27	89
E3 activity/RING/RING	3.40e-08	34.6	31	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl....asggk.......tcPvtrqplteedlvPn 58
           + f C I l+  rdPv++ +G+ y   +I kwl    +   +       +cPv++++++++dlvP 
   Q: 27   ACFDCNICLDFARDPVITLCGHLYCWPCIYKWLhfqsD---SlssderpQCPVCKAEISQTDLVPL 89
           68*******************************76551...14556678***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iCl+  +d p+++ CgH+++  C++kw   +  + ss  + +CP+C+
   Q: 31   CNICLDFARD-PVITLCGHLYCWPCIYKWlhfQSDSLSSDERPQCPVCK 78
           99****9988.999***************99877777889999*****7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MALEQYYSNE WKSIPTPESS DSEKTSACFD CNICLDFARD PVITLCGHLY CWPCIYKWLH 60
FQSDSLSSDE RPQCPVCKAE ISQTDLVPLY GRGETLPESE PENKLTLKVP PRPPAFSPSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTTGG AGCAGTATTA TTCAAACGAG TGGAAATCGA TCCCTACTCC AGAATCATCA 60
GACTCAGAGA AGACTTCTGC CTGCTTTGAT TGCAACATCT GCTTGGACTT TGCCCGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101247183

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	34.65	2.00e-27	115.00
IUUC-Aly-006090	Arabidopsis lyrata	44.06	1.00e-41	162.00
IUUC-Ath-006841	Arabidopsis thaliana	40.44	2.00e-42	164.00
IUUC-Bdi-014665	Brachypodium distachyon	35.64	3.00e-27	114.00
IUUC-Bol-015969	Brassica oleracea	42.18	3.00e-41	160.00
IUUC-Bra-016747	Brassica rapa	45.33	2.00e-43	167.00
IUUC-Gma-043239	Glycine max	52.21	4.00e-63	233.00
IUUC-Lpe-051528	Leersia perrieri	66.23	3.00e-26	112.00
IUUC-Mtr-058469	Medicago truncatula	45.34	2.00e-49	188.00
IUUC-Oba-075301	Oryza barthii	60.27	1.00e-20	92.80
IUUC-Ogl-077734	Oryza glaberrima	48.06	2.00e-25	108.00
IUUC-Oru-085110	Oryza rufipogon	60.27	1.00e-20	93.20
IUUC-Pop-099091	Populus trichocarpa	53.98	3.00e-65	240.00
IUUC-Ppe-101989	Prunus persica	59.13	9.00e-74	269.00
IUUC-Sit-110543	Setaria italica	39.44	2.00e-30	125.00
IUUC-Stu-112310	Solanum tuberosum	92.17	4.00e-118	416.00
IUUC-Sbi-114178	Sorghum bicolor	39.72	1.00e-30	125.00
IUUC-Tca-121250	Theobroma cacao	57.08	2.00e-70	258.00
IUUC-Tae-123926	Triticum aestivum	36.32	3.00e-30	124.00
IUUC-Vvi-130942	Vitis vinifera	56.58	3.00e-72	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence