iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112310

Ensembl Protein ID

PGSC0003DMT400076419

UniProt Accession

M1CWQ6; M1CWQ6_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400029719	PGSC0003DMT400076419	PGSC0003DMT400076419

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-07	33.0	27	89
E3 activity/RING/RING	2.70e-08	35.4	31	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl....asggk.......tcPvtrqplteedlvPn 58
           + f C I l+  rdPvv+ +G+ y   +I kw+    +   +        cPv++++++++dlvP 
   Q: 27   ACFDCNICLDFARDPVVTLCGHLYCWPCIYKWFhfqsD---SlssderpRCPVCKAEISQTDLVPL 89
           68*******************************76551...145566689**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iCl+  +d p+v+ CgH+++  C++kw   +  + ss  + rCP+C+
   Q: 31   CNICLDFARD-PVVTLCGHLYCWPCIYKWfhfQSDSLSSDERPRCPVCK 78
           99****9999.999*****************877777899999*****7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAFEQYYSNE WKSIPTPESS DSEKTSACFD CNICLDFARD PVVTLCGHLY CWPCIYKWFH 60
FQSDSLSSDE RPRCPVCKAE ISQTDLVPLY GRGVTLPESE PENKLTLKVP PRPSAFGPLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCTCAGCA AACTTCTTGT TTACCTCTTT AAAGAAACCT ATTTTCTTCT CTTTTTCCTC 60
TGTTTAATCA CATGGGATTC TCCATTTGAA GCTTGAAAGT CTGAAACTTT GATTGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102594656

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014665	Brachypodium distachyon	35.90	3.00e-27	114.00
IUUC-Bol-015969	Brassica oleracea	41.71	2.00e-39	154.00
IUUC-Gma-044047	Glycine max	52.47	1.00e-62	231.00
IUUC-Mtr-057847	Medicago truncatula	50.00	4.00e-50	189.00
IUUC-Oba-075301	Oryza barthii	60.81	2.00e-20	91.70
IUUC-Ogl-077734	Oryza glaberrima	35.48	5.00e-26	110.00
IUUC-Ogu-078280	Oryza glumaepatula	35.48	5.00e-26	109.00
IUUC-Oin-079906	Oryza indica	35.48	5.00e-26	109.00
IUUC-Olo-081070	Oryza longistaminata	35.19	2.00e-26	110.00
IUUC-Ome-081915	Oryza meridionalis	35.02	2.00e-25	108.00
IUUC-Oni-082950	Oryza nivara	35.48	5.00e-26	109.00
IUUC-Opu-083549	Oryza punctata	35.94	2.00e-26	111.00
IUUC-Osa-085904	Oryza sativa	35.48	5.00e-26	109.00
IUUC-Pop-099091	Populus trichocarpa	54.42	5.00e-65	239.00
IUUC-Ppe-101989	Prunus persica	60.00	6.00e-73	266.00
IUUC-Sly-111102	Solanum lycopersicum	92.17	2.00e-102	363.00
IUUC-Sbi-114178	Sorghum bicolor	40.19	1.00e-31	129.00
IUUC-Tca-121250	Theobroma cacao	57.08	7.00e-68	248.00
IUUC-Tae-123926	Triticum aestivum	37.33	3.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence