iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006985

UUCD1 version

UUC-ArT-01336

Ensembl Protein ID

AT3G61460.1

UniProt Accession

Q9XF92; Q9XF92_ARATH

Genbank Protein ID

AAD27870.1; AAL38776.1; AAM51382.1; AAM63625.1; AEE80208.1; CAB71076.1

Protein Name

BRH1 RING finger protein; Brassinosteroid-responsive RING-H2; Putative RING finger protein; RING finger protein

Genbank Nucleotide ID

AF134155; AY065300; AY117307; AY086562; CP002686; AL132962

Gene Name

BRH1; F2A19.60; At3g61460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G61460	AT3G61460.1	AT3G61460.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-08	33.6	94	137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +++ + l+ C H+fh++Cl +w     +   + +CPlCr
   Q: 94   CAVCLYEFegEQEIRWLRnCRHIFHRSCLDRW-----MDHDQKTCPLCR 137
           ********88555888888*************.....688899*****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGFPVGYTEV FLPKLFVQTL SILGFIRTIV FSIFRFLGLS DFLEMDQTWP DYTSYPTRIP 60
ETRSPFSALL IREILPVIKF EELTNSGEDL PENCAVCLYE FEGEQEIRWL RNCRHIFHRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAATACCGA GAACGTAACC CTATTTATCT ACTGCCTAGT GTAAATTTCA CGTGTTAAAT 60
AACATTCAAC GAATCCCAAA AATTAAAATT AAAAAACGTA ATTCCATTTA TAAAAAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009741--P:response to brassinosteroid
GO:0010200--P:response to chitin

KEGG

ath:AT3G61460

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000163	Aegilops tauschii	37.93	3.00e-18	84.00
IUUC-Atr-002812	Amborella trichopoda	58.64	6.00e-45	172.00
IUUC-Aly-006447	Arabidopsis lyrata	100.00	5.00e-99	352.00
IUUC-Bdi-014238	Brachypodium distachyon	40.80	5.00e-25	106.00
IUUC-Bol-016059	Brassica oleracea	91.33	4.00e-90	322.00
IUUC-Bra-017331	Brassica rapa	91.91	3.00e-91	326.00
IUUC-Cne-026985	Cryptococcus neoformans	35.48	8.00e-11	62.40
IUUC-Gma-042994	Glycine max	60.74	8.00e-53	198.00
IUUC-Hvu-047847	Hordeum vulgare	53.40	3.00e-22	97.10
IUUC-Lpe-050715	Leersia perrieri	53.27	1.00e-25	108.00
IUUC-Mtr-057802	Medicago truncatula	64.42	2.00e-56	210.00
IUUC-Mac-064617	Musa acuminata	47.09	1.00e-47	181.00
IUUC-Oba-075031	Oryza barthii	40.68	7.00e-20	88.60
IUUC-Obr-076564	Oryza brachyantha	55.21	7.00e-26	108.00
IUUC-Ogl-077056	Oryza glaberrima	40.48	5.00e-27	113.00
IUUC-Ogu-078300	Oryza glumaepatula	40.48	4.00e-27	114.00
IUUC-Oin-080017	Oryza indica	40.48	5.00e-27	113.00
IUUC-Ome-081373	Oryza meridionalis	40.48	5.00e-27	113.00
IUUC-Oni-083028	Oryza nivara	40.48	5.00e-27	113.00
IUUC-Opu-083259	Oryza punctata	53.61	3.00e-26	111.00
IUUC-Oru-084931	Oryza rufipogon	40.48	5.00e-27	113.00
IUUC-Osa-085848	Oryza sativa	40.48	5.00e-27	113.00
IUUC-Pop-099117	Populus trichocarpa	70.24	2.00e-63	234.00
IUUC-Ppe-102039	Prunus persica	71.88	2.00e-63	233.00
IUUC-Sja-107932	Schizosaccharomyces japonicus	52.00	2.00e-12	67.00
IUUC-Spo-108030	Schizosaccharomyces pombe	33.33	9.00e-14	71.20
IUUC-Sit-110459	Setaria italica	35.86	3.00e-20	90.90
IUUC-Sly-111431	Solanum lycopersicum	65.06	2.00e-51	194.00
IUUC-Stu-112490	Solanum tuberosum	65.66	1.00e-51	194.00
IUUC-Sbi-114509	Sorghum bicolor	55.68	8.00e-26	109.00
IUUC-Tca-121864	Theobroma cacao	76.07	5.00e-67	245.00
IUUC-Tae-122742	Triticum aestivum	44.51	4.00e-23	100.00
IUUC-Tur-126801	Triticum urartu	51.52	4.00e-19	86.70
IUUC-Vda-129984	Verticillium dahliae	59.46	1.00e-07	49.30
IUUC-Vvi-130886	Vitis vinifera	71.78	8.00e-65	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence