iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tvi-122554

Ensembl Protein ID

EHK27210

UniProt Accession

G9MDQ1; G9MDQ1_HYPVG

Genbank Protein ID

EHK27210.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABDF02000001

Gene Name

TRIVIDRAFT_55283

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIVIDRAFT_55283	EHK27210	EHK27210

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-42	138.7	193	218
UBD/Beta-Prp	2.30e-89	298.9	362	722

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclafsdtllvsGsdDgtikvWDlrt 32
           d vt  +f   +l+sGs Dg++++WDl +
   Q: 193  DAVTTTNF---RLASGSQDGKVRIWDLNK 218
           56777888...89*************965 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl..................lrslsgheaevtavkfspdgkilvtgseDrtikvwdls.... 82
           ++g+h++ i  +++  pd slla +  ++ i++ +v + k+                  ++ l ghe+ v a++ + +g + +tg++D+t+k+w ++    
   Q: 362  ISGTHDEIID-MAYlLPDHSLLALATNSEDIRLVSVAESKKdgqemtwtksetpffgqvVALLRGHEDIVIALDVDWSGHWVATGAKDNTAKLWRIDpasn 461
           6789999999.6666***********************999*****************99999*******************************5555566 PP
   S: 83   tgkcvhtlkghedsvls..................lsfspsg.dklvsGshdrtirvwdletgqclee.........tlsghdgvvncvvvhpdgnllvsG 155
           t  c  t++gh +s+ +                  l+       +l++Gs+d+ti+ w+++     +          t + hd+ +n ++vh +g+l++s+
   Q: 462  THVCWATFSGHAESLGAvalpktvpaegsaartdpLNH---PpPFLLTGSQDQTIKKWEISRTPQQQGqktnarsvfTRKAHDKDINAINVHHTGQLFASA 559
           99***************99*********9965333333...249****************8776666578999**************************** PP
   S: 156  slDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..............kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs......pnde. 235
           s D+tv++W+++ g++   l+g h++ v  ++f++ +                +++gs d+++klw+l+  +c+rt++gh++ ++ v+ +      ++ + 
   Q: 560  SQDKTVKVWSVEEGEVQGILRG-HKRGVWTVQFSPAQmpalqgedgpvtgkGVILTGSGDKSIKLWNLSDYTCIRTFEGHSNSILKVAWLnmtsrsEQAKg 659
           *********************9.***************************999****************************88887777766555544441 PP
   S: 236  ..rlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkn 297
              ++s++ Dg ++iW+  sg++  tl +h+++v++ av +++ n +v+gs+ds+v +wk +++
   Q: 660  lvQFASAGGDGLVKIWNANSGETECTLDNHEDRVWALAV-HPKTNAVVSGSGDSTVTFWKDTTS 722
           114678889******************************.*******************97665 PP

Organism

Trichoderma virens

Protein Sequence
(Fasta)

MATKQPLKTT FDVERVIRPI YTGGSVAIDN KAQILATTLG EDAILTNPTN GKHLAQIEGD 60
GDSISTLTLT PSGSHLIVCS RSLSMRIFVL KWSSEGDSIE ASLVRTLKPH ATPVIVLAVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACAA AACAGCCCTT GAAGACGACG TTCGACGTCG AGCGCGTCAT TCGGCCAATC 60
TACACTGGAG GGTCTGTTGC AATTGACAAC AAGGCGCAGA TTCTGGCCAC AACTCTGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	28.00	4.00e-98	351.00
IUUC-Aml-002376	Ailuropoda melanoleuca	29.59	2.00e-105	375.00
IUUC-Atr-002486	Amborella trichopoda	28.63	2.00e-110	392.00
IUUC-Apl-003519	Anas platyrhynchos	29.74	6.00e-79	286.00
IUUC-Aca-004363	Anolis carolinensis	27.20	6.00e-47	179.00
IUUC-Aly-006152	Arabidopsis lyrata	27.74	3.00e-102	364.00
IUUC-Ath-006966	Arabidopsis thaliana	27.91	1.00e-104	372.00
IUUC-Ago-007746	Ashbya gossypii	32.12	4.00e-126	443.00
IUUC-Acl-008009	Aspergillus clavatus	49.58	0.00e+00	885.00
IUUC-Afl-008681	Aspergillus flavus	50.69	0.00e+00	847.00
IUUC-Afu-008798	Aspergillus fumigatus	49.04	0.00e+00	843.00
IUUC-Ani-009278	Aspergillus nidulans	48.28	0.00e+00	873.00
IUUC-Ang-009640	Aspergillus niger	48.99	0.00e+00	846.00
IUUC-Aor-010160	Aspergillus oryzae	50.69	0.00e+00	846.00
IUUC-Ate-010320	Aspergillus terreus	50.37	0.00e+00	889.00
IUUC-Bgr-012054	Blumeria graminis	55.78	0.00e+00	974.00
IUUC-Bta-012611	Bos taurus	29.44	6.00e-105	373.00
IUUC-Bci-013797	Botrytis cinerea	61.86	0.00e+00	1120.00
IUUC-Bdi-014384	Brachypodium distachyon	29.94	6.00e-116	410.00
IUUC-Bol-015097	Brassica oleracea	29.15	2.00e-104	372.00
IUUC-Bra-017798	Brassica rapa	29.34	2.00e-104	372.00
IUUC-Cel-018664	Caenorhabditis elegans	25.38	2.00e-78	285.00
IUUC-Cja-019092	Callithrix jacchus	29.56	4.00e-106	377.00
IUUC-Cfa-021040	Canis familiaris	29.77	2.00e-105	375.00
IUUC-Cpo-022529	Cavia porcellus	29.74	5.00e-102	363.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	45.86	1.00e-34	136.00
IUUC-Csa-024205	Chlorocebus sabaeus	29.56	7.00e-108	383.00
IUUC-Cin-025560	Ciona intestinalis	29.82	4.00e-108	384.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	70.09	0.00e+00	1297.00
IUUC-Cne-027082	Cryptococcus neoformans	31.53	6.00e-128	450.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.13	6.00e-26	112.00
IUUC-Dre-028138	Danio rerio	28.23	3.00e-99	355.00
IUUC-Dno-029914	Dasypus novemcinctus	25.57	2.00e-46	178.00
IUUC-Dor-030685	Dipodomys ordii	31.12	1.00e-67	249.00
IUUC-Dse-031429	Dothistroma septosporum	49.58	0.00e+00	886.00
IUUC-Dme-031995	Drosophila melanogaster	26.70	2.00e-64	239.00
IUUC-Ete-033086	Echinops telfairi	32.55	3.00e-66	245.00
IUUC-Eca-034354	Equus caballus	29.63	5.00e-102	363.00
IUUC-Eeu-034832	Erinaceus europaeus	30.78	8.00e-63	233.00
IUUC-Fca-036136	Felis catus	29.81	8.00e-102	363.00
IUUC-Fal-036859	Ficedula albicollis	29.13	2.00e-104	371.00
IUUC-Fox-037863	Fusarium oxysporum	70.92	0.00e+00	1297.00
IUUC-Fso-038389	Fusarium solani	77.43	0.00e+00	1446.00
IUUC-Gmo-038711	Gadus morhua	27.86	2.00e-86	312.00
IUUC-Ggr-039820	Gaeumannomyces graminis	62.84	0.00e+00	1137.00
IUUC-Gga-040263	Gallus gallus	28.83	3.00e-106	377.00
IUUC-Gac-041291	Gasterosteus aculeatus	30.40	3.00e-107	381.00
IUUC-Gma-044026	Glycine max	28.60	4.00e-111	394.00
IUUC-Ggo-044693	Gorilla gorilla	29.94	7.00e-108	383.00
IUUC-Hsa-046048	Homo sapiens	29.94	5.00e-108	383.00
IUUC-Hvu-047608	Hordeum vulgare	29.05	7.00e-114	403.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	30.50	8.00e-113	399.00
IUUC-Kpa-049209	Komagataella pastoris	33.89	5.00e-139	486.00
IUUC-Lch-050085	Latimeria chalumnae	28.85	3.00e-96	344.00
IUUC-Lpe-050945	Leersia perrieri	29.29	2.00e-110	392.00
IUUC-Loc-052679	Lepisosteus oculatus	31.76	1.00e-120	426.00
IUUC-Laf-053685	Loxodonta africana	29.71	7.00e-97	346.00
IUUC-Mcc-055861	Macaca mulatta	29.44	1.00e-105	376.00
IUUC-Meu-056820	Macropus eugenii	27.58	3.00e-41	161.00
IUUC-Mor-057234	Magnaporthe oryzae	60.98	0.00e+00	1069.00
IUUC-Mpo-057456	Magnaporthe poae	62.70	0.00e+00	898.00
IUUC-Mtr-058122	Medicago truncatula	28.82	4.00e-112	397.00
IUUC-Mla-058980	Melampsora laricipopulina	30.50	4.00e-107	380.00
IUUC-Mga-060080	Meleagris gallopavo	29.54	1.00e-106	379.00
IUUC-Mvi-060338	Microbotryum violaceum	32.23	2.00e-136	478.00
IUUC-Mmr-060762	Microcebus murinus	29.36	5.00e-103	367.00
IUUC-Mdo-061975	Monodelphis domestica	29.74	1.00e-98	352.00
IUUC-Mmu-064038	Mus musculus	29.38	3.00e-105	374.00
IUUC-Mac-065189	Musa acuminata	27.78	9.00e-115	406.00
IUUC-Mpu-066526	Mustela putorius furo	29.74	1.00e-103	369.00
IUUC-Mlu-067716	Myotis lucifugus	29.79	3.00e-112	397.00
IUUC-Nfi-068474	Neosartorya fischeri	49.84	0.00e+00	862.00
IUUC-Ncr-068826	Neurospora crassa	62.27	0.00e+00	1123.00
IUUC-Nle-069832	Nomascus leucogenys	29.78	4.00e-109	387.00
IUUC-Opr-071183	Ochotona princeps	28.36	4.00e-98	350.00
IUUC-Ont-072371	Oreochromis niloticus	31.04	2.00e-108	385.00
IUUC-Oan-073491	Ornithorhynchus anatinus	26.40	3.00e-82	298.00
IUUC-Oba-075963	Oryza barthii	28.19	3.00e-110	391.00
IUUC-Obr-076173	Oryza brachyantha	28.94	8.00e-109	386.00
IUUC-Ogl-077692	Oryza glaberrima	28.16	1.00e-109	389.00
IUUC-Ogu-078965	Oryza glumaepatula	28.19	3.00e-110	391.00
IUUC-Oin-079708	Oryza indica	28.19	1.00e-110	392.00
IUUC-Olo-080679	Oryza longistaminata	28.28	2.00e-110	391.00
IUUC-Oni-082960	Oryza nivara	28.09	3.00e-110	391.00
IUUC-Opu-083282	Oryza punctata	28.31	4.00e-107	380.00
IUUC-Oru-085224	Oryza rufipogon	28.19	2.00e-110	392.00
IUUC-Osa-085320	Oryza sativa	28.19	2.00e-110	392.00
IUUC-Ola-086370	Oryzias latipes	24.95	1.00e-37	149.00
IUUC-Olu-087814	Ostreococcus lucimarinus	27.34	8.00e-77	280.00
IUUC-Oga-088458	Otolemur garnettii	30.13	2.00e-109	388.00
IUUC-Oar-090032	Ovis aries	27.68	4.00e-72	264.00
IUUC-Ptr-090749	Pan troglodytes	30.06	5.00e-109	387.00
IUUC-Pan-091691	Papio anubis	29.11	3.00e-97	348.00
IUUC-Psi-093200	Pelodiscus sinensis	29.71	4.00e-103	367.00
IUUC-Pma-094165	Petromyzon marinus	28.00	7.00e-75	273.00
IUUC-Pno-095048	Phaeosphaeria nodorum	52.67	0.00e+00	793.00
IUUC-Ppa-095336	Physcomitrella patens	30.10	2.00e-107	382.00
IUUC-Pfo-096132	Poecilia formosa	29.04	2.00e-98	352.00
IUUC-Pab-097855	Pongo abelii	30.27	3.00e-109	387.00
IUUC-Pop-099434	Populus trichocarpa	28.78	1.00e-103	369.00
IUUC-Pca-100232	Procavia capensis	32.95	7.00e-37	147.00
IUUC-Ppe-101665	Prunus persica	29.58	2.00e-111	395.00
IUUC-Pva-102178	Pteropus vampyrus	30.43	5.00e-107	380.00
IUUC-Pgr-103288	Puccinia graminis	27.13	5.00e-92	330.00
IUUC-Ptt-103808	Puccinia triticina	28.36	6.00e-84	303.00
IUUC-Pte-104205	Pyrenophora teres	55.16	0.00e+00	961.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	53.24	0.00e+00	911.00
IUUC-Rno-105617	Rattus norvegicus	29.79	2.00e-105	374.00
IUUC-Sce-106281	Saccharomyces cerevisiae	32.96	4.00e-132	464.00
IUUC-Sha-107378	Sarcophilus harrisii	30.14	1.00e-99	356.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	36.94	2.00e-155	540.00
IUUC-Spo-108361	Schizosaccharomyces pombe	35.89	4.00e-138	483.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	63.11	0.00e+00	1163.00
IUUC-Smo-109257	Selaginella moellendorffii	29.97	7.00e-115	406.00
IUUC-Sit-110258	Setaria italica	28.95	2.00e-116	412.00
IUUC-Sly-111521	Solanum lycopersicum	27.69	1.00e-104	372.00
IUUC-Stu-112718	Solanum tuberosum	36.76	6.00e-24	101.00
IUUC-Sbi-114768	Sorghum bicolor	27.86	2.00e-113	401.00
IUUC-Sre-115159	Sporisorium reilianum	29.47	3.00e-100	358.00
IUUC-Ssc-116342	Sus scrofa	27.08	6.00e-53	200.00
IUUC-Tgu-117320	Taeniopygia guttata	28.56	5.00e-98	350.00
IUUC-Tru-118024	Takifugu rubripes	29.42	3.00e-101	361.00
IUUC-Tni-119971	Tetraodon nigroviridis	29.63	4.00e-98	350.00
IUUC-Tca-121248	Theobroma cacao	28.05	6.00e-109	387.00
IUUC-Tre-122079	Trichoderma reesei	92.75	0.00e+00	1670.00
IUUC-Tae-125845	Triticum aestivum	29.74	3.00e-115	408.00
IUUC-Tur-126436	Triticum urartu	29.85	9.00e-92	329.00
IUUC-Tme-126942	Tuber melanosporum	45.50	0.00e+00	721.00
IUUC-Ttr-128964	Tursiops truncatus	29.29	8.00e-104	369.00
IUUC-Uma-129473	Ustilago maydis	30.85	5.00e-101	360.00
IUUC-Vda-129749	Verticillium dahliae	72.13	0.00e+00	1201.00
IUUC-Vvi-131511	Vitis vinifera	28.77	3.00e-105	374.00
IUUC-Xtr-132816	Xenopus tropicalis	26.29	5.00e-78	284.00
IUUC-Xma-133672	Xiphophorus maculatus	28.79	1.00e-100	359.00
IUUC-Yli-134602	Yarrowia lipolytica	38.12	1.00e-168	585.00
IUUC-Zma-135559	Zea mays	28.43	4.00e-107	380.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence