iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006261

Ensembl Protein ID

fgenesh2_kg.4__246__AT2G23140.1

UniProt Accession

D7LEP3; D7LEP3_ARALL

Genbank Protein ID

EFH56743.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_481186

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__246__AT2G23140.1	fgenesh2_kg.4__246__AT2G23140.1	fgenesh2_kg.4__246__AT2G23140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.70e-30	104.5	233	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++++f Cp+sle+M+dPv+++sG+ty+++ I++w++ g k cP+trq+lt+++l+Pn+t+++li +wce+n++
   Q: 233  ILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIANWCETNDV 305
           6789******************************************************************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEILKVLIGS ISSFLNLSSS KHIDLDPFEK YYKRVEELLK VLKPIADVVV NSDLVLDEKL 60
GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLIPK MRDTIVDTFK FLMSSKNHLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAATCT TAAAAGTTCT TATCGGAAGT ATCTCGTCGT TTCTAAATCT ATCATCTTCC 60
AAACATATAG ATTTAGACCC ATTTGAGAAG TACTATAAAA GAGTTGAAGA GTTATTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:1904822--F:ubiquitin protein ligase activity involved in chloroplast disassembly
GO:0048658--P:anther wall tapetum development
GO:0034614--P:cellular response to reactive oxygen species

KEGG

aly:ARALYDRAFT_481186

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	47.91	0.00e+00	640.00
IUUC-Atr-002793	Amborella trichopoda	54.15	0.00e+00	804.00
IUUC-Ath-006925	Arabidopsis thaliana	98.02	0.00e+00	1599.00
IUUC-Bdi-014197	Brachypodium distachyon	50.61	0.00e+00	679.00
IUUC-Bol-015762	Brassica oleracea	86.22	0.00e+00	1350.00
IUUC-Bra-018049	Brassica rapa	85.63	0.00e+00	1345.00
IUUC-Gma-043920	Glycine max	59.83	0.00e+00	891.00
IUUC-Hvu-047089	Hordeum vulgare	49.82	0.00e+00	699.00
IUUC-Lpe-051326	Leersia perrieri	50.48	0.00e+00	664.00
IUUC-Mtr-057910	Medicago truncatula	57.93	0.00e+00	853.00
IUUC-Mac-064791	Musa acuminata	81.18	5.00e-134	470.00
IUUC-Oba-075484	Oryza barthii	51.40	0.00e+00	641.00
IUUC-Obr-076317	Oryza brachyantha	50.36	0.00e+00	630.00
IUUC-Ogl-077857	Oryza glaberrima	51.40	0.00e+00	642.00
IUUC-Ogu-078826	Oryza glumaepatula	51.33	0.00e+00	644.00
IUUC-Oin-079538	Oryza indica	51.40	0.00e+00	643.00
IUUC-Olo-080425	Oryza longistaminata	50.31	8.00e-177	613.00
IUUC-Ome-081524	Oryza meridionalis	51.84	0.00e+00	646.00
IUUC-Oni-082077	Oryza nivara	51.40	0.00e+00	641.00
IUUC-Opu-083165	Oryza punctata	51.16	0.00e+00	657.00
IUUC-Oru-085180	Oryza rufipogon	51.33	0.00e+00	656.00
IUUC-Osa-085315	Oryza sativa	51.33	0.00e+00	656.00
IUUC-Ppa-095860	Physcomitrella patens	69.93	5.00e-109	388.00
IUUC-Pop-099220	Populus trichocarpa	65.45	0.00e+00	739.00
IUUC-Sit-110349	Setaria italica	49.94	0.00e+00	672.00
IUUC-Sly-111082	Solanum lycopersicum	57.04	0.00e+00	840.00
IUUC-Stu-112751	Solanum tuberosum	56.87	0.00e+00	858.00
IUUC-Sbi-114085	Sorghum bicolor	72.63	7.00e-135	474.00
IUUC-Tca-121129	Theobroma cacao	66.13	0.00e+00	1019.00
IUUC-Tae-125886	Triticum aestivum	49.36	0.00e+00	690.00
IUUC-Tur-126525	Triticum urartu	45.12	3.00e-179	621.00
IUUC-Tbe-127244	Tupaia belangeri	26.59	1.00e-08	54.30
IUUC-Vvi-131364	Vitis vinifera	59.86	0.00e+00	890.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence