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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105759
UUCD1 version UUC-RaN-00811
Ensembl Protein ID ENSRNOP00000059093.2
UniProt Accession Q4V889; D4A8S6; Q4V889_RAT
Genbank Protein ID AAH97491.1; EDM07169.1
Protein Name Ring finger protein 12; Ring finger protein 12, isoform CRA_b
Genbank Nucleotide ID AABR07039328; CH473969
Gene Name LOC100910646; Rlim; NEWGENE_1559832; Rnf12; rCG_38103
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000045695.2 ENSRNOT00000067009.3 ENSRNOP00000059093.2
Annotation
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 4.40e-07 30.7 549 590
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 549  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 590
           9*******5554499****************......**********8 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MENSDSNDKG SDQSAAQRRS QMDRLDREEA FYQFVNNLSE EDYRLMRDNN LLGTPGESTE 60
EELLRRLQQI KEGPPPQSSD ENRAGESSDD VSNSDSIIDW LNSVRQSGNT TRSGQRGNQS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105759|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACTCTCTGAC CTAGACTTCT AGTATACCAG TGTTTTCCCA ATGTTTTTCT ATTCTATTCC 60
ATTTACTTGT TTTTCTTAAA ATTCACCTCT ATGCCTGCAT TGTGGTTTCC AAGTAGAGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105759|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060816--P:random inactivation of X chromosome
GO:1900095--P:regulation of dosage compensation by inactivation of X chromosome
KEGG rno:108348168; rno:317241
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000316 Aegilops tauschii 42.37 6.00e-10 57.00
IUUC-Aml-001407 Ailuropoda melanoleuca 89.04 0.00e+00 645.00
IUUC-Atr-002539 Amborella trichopoda 47.54 1.00e-14 73.90
IUUC-Apl-003969 Anas platyrhynchos 72.36 0.00e+00 728.00
IUUC-Aca-005377 Anolis carolinensis 68.70 2.00e-138 486.00
IUUC-Aly-005870 Arabidopsis lyrata 43.62 3.00e-16 79.30
IUUC-Ath-007543 Arabidopsis thaliana 49.21 3.00e-16 78.20
IUUC-Ame-011097 Astyanax mexicanus 59.25 3.00e-106 379.00
IUUC-Bta-013113 Bos taurus 89.10 0.00e+00 648.00
IUUC-Bdi-014392 Brachypodium distachyon 47.06 3.00e-14 72.00
IUUC-Bol-015085 Brassica oleracea 43.01 3.00e-16 79.30
IUUC-Bra-017624 Brassica rapa 43.01 3.00e-16 79.30
IUUC-Cja-018860 Callithrix jacchus 87.67 1.00e-178 619.00
IUUC-Cfa-020358 Canis familiaris 88.81 0.00e+00 632.00
IUUC-Cpo-021533 Cavia porcellus 87.63 1.00e-160 558.00
IUUC-Cre-022755 Chlamydomonas reinhardtii 44.68 1.00e-13 67.40
IUUC-Csa-023242 Chlorocebus sabaeus 86.85 4.00e-168 584.00
IUUC-Cho-024536 Choloepus hoffmanni 80.88 2.00e-157 548.00
IUUC-Dre-027894 Danio rerio 54.40 9.00e-160 556.00
IUUC-Dno-029606 Dasypus novemcinctus 89.50 0.00e+00 676.00
IUUC-Dor-031042 Dipodomys ordii 82.51 3.00e-163 567.00
IUUC-Ete-033099 Echinops telfairi 82.81 1.00e-170 593.00
IUUC-Eca-033976 Equus caballus 88.86 0.00e+00 678.00
IUUC-Eeu-034964 Erinaceus europaeus 79.46 0.00e+00 719.00
IUUC-Fca-035662 Felis catus 89.04 0.00e+00 646.00
IUUC-Fal-036996 Ficedula albicollis 71.48 0.00e+00 705.00
IUUC-Gmo-039207 Gadus morhua 75.63 2.00e-42 166.00
IUUC-Gga-040816 Gallus gallus 73.36 0.00e+00 734.00
IUUC-Gac-041767 Gasterosteus aculeatus 62.46 3.00e-98 352.00
IUUC-Gma-043292 Glycine max 47.37 2.00e-16 79.70
IUUC-Ggo-044754 Gorilla gorilla 89.80 0.00e+00 649.00
IUUC-Hsa-045776 Homo sapiens 89.80 0.00e+00 649.00
IUUC-Hvu-047745 Hordeum vulgare 50.98 3.00e-14 72.80
IUUC-Itr-048044 Ictidomys tridecemlineatus 89.12 0.00e+00 651.00
IUUC-Lch-050178 Latimeria chalumnae 68.66 8.00e-121 427.00
IUUC-Lpe-051680 Leersia perrieri 42.86 3.00e-14 73.20
IUUC-Loc-052124 Lepisosteus oculatus 61.02 4.00e-155 541.00
IUUC-Laf-054328 Loxodonta africana 88.66 0.00e+00 639.00
IUUC-Mcc-054739 Macaca mulatta 89.80 0.00e+00 647.00
IUUC-Meu-056359 Macropus eugenii 72.25 0.00e+00 682.00
IUUC-Mtr-058167 Medicago truncatula 47.37 1.00e-15 77.00
IUUC-Mga-059838 Meleagris gallopavo 73.68 0.00e+00 739.00
IUUC-Mmr-060608 Microcebus murinus 88.17 0.00e+00 631.00
IUUC-Mdo-061961 Monodelphis domestica 76.57 3.00e-136 478.00
IUUC-Mmu-064278 Mus musculus 94.05 1.00e-175 609.00
IUUC-Mac-064639 Musa acuminata 42.22 8.00e-15 74.70
IUUC-Mpu-066539 Mustela putorius furo 78.76 5.00e-143 501.00
IUUC-Mlu-066930 Myotis lucifugus 89.12 0.00e+00 655.00
IUUC-Nle-069311 Nomascus leucogenys 90.02 0.00e+00 648.00
IUUC-Opr-071124 Ochotona princeps 90.10 3.00e-80 292.00
IUUC-Ont-071511 Oreochromis niloticus 85.05 8.00e-55 208.00
IUUC-Oan-073036 Ornithorhynchus anatinus 68.62 6.00e-138 484.00
IUUC-Ocu-073795 Oryctolagus cuniculus 87.67 6.00e-166 577.00
IUUC-Oba-075403 Oryza barthii 42.86 4.00e-14 72.80
IUUC-Obr-076503 Oryza brachyantha 42.86 5.00e-14 72.40
IUUC-Ogl-077574 Oryza glaberrima 42.86 4.00e-14 72.80
IUUC-Ogu-077986 Oryza glumaepatula 42.86 4.00e-14 72.80
IUUC-Oin-079091 Oryza indica 42.86 3.00e-14 73.20
IUUC-Olo-080996 Oryza longistaminata 37.63 1.00e-13 70.90
IUUC-Ome-081627 Oryza meridionalis 42.86 4.00e-14 73.20
IUUC-Oni-082260 Oryza nivara 42.86 4.00e-14 72.80
IUUC-Opu-083578 Oryza punctata 42.86 3.00e-14 73.20
IUUC-Oru-084794 Oryza rufipogon 42.86 4.00e-14 72.80
IUUC-Osa-085348 Oryza sativa 42.86 4.00e-14 72.80
IUUC-Ola-087461 Oryzias latipes 90.32 5.00e-50 192.00
IUUC-Olu-087781 Ostreococcus lucimarinus 40.30 4.00e-13 67.40
IUUC-Oga-088022 Otolemur garnettii 88.63 0.00e+00 660.00
IUUC-Oar-089348 Ovis aries 89.55 0.00e+00 649.00
IUUC-Ptr-090604 Pan troglodytes 89.34 0.00e+00 647.00
IUUC-Pan-092322 Papio anubis 89.80 0.00e+00 647.00
IUUC-Psi-093936 Pelodiscus sinensis 69.72 0.00e+00 675.00
IUUC-Ppa-095197 Physcomitrella patens 46.58 2.00e-16 81.30
IUUC-Pfo-096616 Poecilia formosa 89.13 5.00e-49 189.00
IUUC-Pab-098671 Pongo abelii 90.25 0.00e+00 650.00
IUUC-Pop-099808 Populus trichocarpa 47.30 4.00e-16 79.00
IUUC-Pca-100263 Procavia capensis 88.17 0.00e+00 637.00
IUUC-Pva-102709 Pteropus vampyrus 86.62 3.00e-171 595.00
IUUC-Ptt-103976 Puccinia triticina 43.75 2.00e-10 59.30
IUUC-Sha-106792 Sarcophilus harrisii 72.74 0.00e+00 650.00
IUUC-Smo-109572 Selaginella moellendorffii 44.09 1.00e-15 76.60
IUUC-Sit-109852 Setaria italica 42.86 4.00e-14 72.80
IUUC-Sly-111405 Solanum lycopersicum 45.00 2.00e-16 79.70
IUUC-Stu-112609 Solanum tuberosum 46.25 1.00e-16 80.50
IUUC-Sar-113271 Sorex araneus 81.26 3.00e-163 568.00
IUUC-Sbi-114435 Sorghum bicolor 42.86 4.00e-14 72.80
IUUC-Ssc-115738 Sus scrofa 89.04 0.00e+00 661.00
IUUC-Tgu-117205 Taeniopygia guttata 72.30 0.00e+00 717.00
IUUC-Tru-118123 Takifugu rubripes 86.67 2.00e-54 206.00
IUUC-Tsy-119421 Tarsius syrichta 89.93 0.00e+00 696.00
IUUC-Tni-120299 Tetraodon nigroviridis 67.35 7.00e-86 311.00
IUUC-Tca-121367 Theobroma cacao 47.37 2.00e-16 80.10
IUUC-Tae-123264 Triticum aestivum 36.27 7.00e-16 78.20
IUUC-Tur-126084 Triticum urartu 42.86 2.00e-13 72.40
IUUC-Tbe-127543 Tupaia belangeri 88.20 0.00e+00 913.00
IUUC-Vpa-130058 Vicugna pacos 89.93 0.00e+00 655.00
IUUC-Vvi-131093 Vitis vinifera 46.05 4.00e-16 79.00
IUUC-Xtr-132663 Xenopus tropicalis 61.56 5.00e-99 355.00
IUUC-Xma-133076 Xiphophorus maculatus 59.04 5.00e-98 351.00
Created Date 25-Jun-2017

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