iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oni-083078

Ensembl Protein ID

ONIVA12G16850.1

UniProt Accession

A0A0E0JC34; A0A0E0JC34_ORYNI

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ONIVA12G16850	ONIVA12G16850.1	ONIVA12G16850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.10e-17	65.1	100	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt..lt.........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           ++vkvs++g+++++++dl+++ ++++L++a+++  l+         +++ s++a++YeD+dGDl+ l++D+++++++s       ++rl+i+k
   Q: 100  LFVKVSMDGAPYLRKIDLKVYKGYRELREALEAmfLCfsggaaadaAVNPSDFAVTYEDKDGDLM-LVGDVPFEMFIS------TCKRLRIMK 185
           68*******************************7644899999*999999***************.************......9******98 PP

Organism

Oryza nivara

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MENLKATELR LGLPGTEEEA APPPSTPRAG SKRALAGEPD QAKIKPAAAA KAQVVGWPPV 60
RSYRKSCLQP TTTTTKSKPP PAAAAAETQQ KEDVAGAGGL FVKVSMDGAP YLRKIDLKVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAAACATC GCCATTGCTG CTCAGCTAGC AGCCACGAAG ACAAAGTCAG AGGTCACACA 60
GCTCATCGTC TCGAGCTACC TAGCTGGAAG AAGAAGAGGA AGAAGAGGAG GAGGAGCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	56.73	7.00e-48	182.00
IUUC-Aly-005805	Arabidopsis lyrata	50.25	2.00e-43	167.00
IUUC-Ath-007370	Arabidopsis thaliana	49.50	1.00e-45	176.00
IUUC-Bdi-014020	Brachypodium distachyon	66.33	5.00e-63	233.00
IUUC-Bol-015408	Brassica oleracea	48.99	8.00e-44	169.00
IUUC-Bra-017254	Brassica rapa	50.00	5.00e-45	172.00
IUUC-Cin-025204	Ciona intestinalis	32.56	2.50e-01	29.60
IUUC-Csv-025833	Ciona savignyi	31.25	1.30e-01	29.30
IUUC-Fal-037105	Ficedula albicollis	41.18	3.30e-01	28.90
IUUC-Gma-042959	Glycine max	50.72	2.00e-46	177.00
IUUC-Hvu-047853	Hordeum vulgare	69.76	1.00e-65	241.00
IUUC-Lpe-051475	Leersia perrieri	57.00	1.00e-47	182.00
IUUC-Mtr-058771	Medicago truncatula	47.89	4.00e-43	167.00
IUUC-Mac-064820	Musa acuminata	52.11	5.00e-49	186.00
IUUC-Oba-075141	Oryza barthii	99.49	8.00e-88	315.00
IUUC-Obr-076144	Oryza brachyantha	61.84	4.00e-56	209.00
IUUC-Ogl-077720	Oryza glaberrima	57.60	1.00e-51	195.00
IUUC-Ogu-078093	Oryza glumaepatula	99.49	4.00e-92	329.00
IUUC-Oin-079780	Oryza indica	100.00	2.00e-87	313.00
IUUC-Opu-083449	Oryza punctata	55.66	5.00e-48	184.00
IUUC-Oru-084991	Oryza rufipogon	100.00	2.00e-87	313.00
IUUC-Osa-085321	Oryza sativa	100.00	2.00e-87	313.00
IUUC-Pop-099361	Populus trichocarpa	52.17	1.00e-47	181.00
IUUC-Ppe-101322	Prunus persica	52.71	8.00e-45	172.00
IUUC-Sit-109841	Setaria italica	68.34	6.00e-63	232.00
IUUC-Sly-111462	Solanum lycopersicum	48.47	4.00e-43	166.00
IUUC-Stu-112636	Solanum tuberosum	50.52	7.00e-45	172.00
IUUC-Sbi-114296	Sorghum bicolor	60.96	3.00e-57	214.00
IUUC-Tca-121147	Theobroma cacao	54.11	2.00e-46	177.00
IUUC-Tae-123807	Triticum aestivum	67.32	6.00e-65	239.00
IUUC-Vvi-131595	Vitis vinifera	53.17	1.00e-46	178.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence