iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095189

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545268

Gene Name

PHYPADRAFT_152968

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S381_35V6	PP1S381_35V6.2	PP1S381_35V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-09	39.1	146	185
E3 activity/RING/U-box	4.00e-06	27.6	144	192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+  ++ p+++pCgH f+++C+q+w     + +++ +C  Cr
   Q: 146  CIFCLQLAER-PVTTPCGHNFCLKCFQRW-----VGQGKKTCGKCR 185
           **********.******************.....899999999887 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteed 54
           ++C   l+l + Pv++p+G+ +  ++ ++w+ +g+ktc ++r+ +  ++
   Q: 144  LNCIFCLQLAERPVTTPCGHNFCLKCFQRWVGQGKKTCGKCRAAIPAKM 192
           5677789999******************************999886655 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MADLPCDADG MCMVCKIVPP DCDVLLCSSC VSPWHMRCLN PPVKLVPLGD WDCPDCLLPP 60
PSDMPSIVQK PVAVPEEGNL VSKIHAIQAD STLTDGEKAK RRQELMSKGL VTNYSAEASS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTGCTTGA TTGATGCTTC TCACCGTATC GTGTTTAGGT GTGTTGCGAA TCGGGGGGAG 60
GATCAAGGTG TGTTCGGAGG AGTTATGTGT TTCGGTGTTT TCTGGACTTT GCCTTAGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010216--P:maintenance of DNA methylation
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing

KEGG

ppp:PHYPADRAFT_152968

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000242	Aegilops tauschii	65.46	8.00e-157	546.00
IUUC-Bdi-014586	Brachypodium distachyon	59.74	0.00e+00	697.00
IUUC-Cho-024857	Choloepus hoffmanni	42.37	4.00e-19	89.40
IUUC-Ete-032923	Echinops telfairi	40.28	3.00e-09	56.20
IUUC-Lpe-050756	Leersia perrieri	56.94	0.00e+00	728.00
IUUC-Lma-052953	Leptosphaeria maculans	28.43	1.00e-11	63.90
IUUC-Mac-064697	Musa acuminata	58.35	0.00e+00	766.00
IUUC-Ncr-068942	Neurospora crassa	29.14	2.00e-07	50.10
IUUC-Oba-075108	Oryza barthii	58.20	0.00e+00	731.00
IUUC-Obr-076572	Oryza brachyantha	57.87	0.00e+00	715.00
IUUC-Ogl-077177	Oryza glaberrima	58.19	0.00e+00	731.00
IUUC-Ogu-078298	Oryza glumaepatula	58.51	0.00e+00	731.00
IUUC-Oin-079911	Oryza indica	58.20	0.00e+00	732.00
IUUC-Ome-081137	Oryza meridionalis	56.44	0.00e+00	689.00
IUUC-Oni-082620	Oryza nivara	58.20	0.00e+00	731.00
IUUC-Opu-083974	Oryza punctata	57.91	0.00e+00	724.00
IUUC-Oru-084976	Oryza rufipogon	58.51	0.00e+00	731.00
IUUC-Osa-085339	Oryza sativa	58.51	0.00e+00	731.00
IUUC-Pop-099561	Populus trichocarpa	56.88	0.00e+00	746.00
IUUC-Pyt-104740	Pyrenophora triticirepentis	31.55	1.00e-16	81.30
IUUC-Sit-110588	Setaria italica	58.00	0.00e+00	717.00
IUUC-Sbi-114726	Sorghum bicolor	58.63	0.00e+00	719.00
IUUC-Tru-117599	Takifugu rubripes	34.50	2.00e-48	186.00
IUUC-Tni-119843	Tetraodon nigroviridis	36.78	3.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence