iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049901

Ensembl Protein ID

ENSLACP00000013081.1

UniProt Accession

H3ATW0; H3ATW0_LATCH

Genbank Protein ID

ENSLACP00000013081

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01118118

Gene Name

RNFT2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000011523.1	ENSLACT00000013177.1	ENSLACP00000013081.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-07	30.9	385	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+ +f++ plvl C+Hvf+++C+  w        +e +CPlCr
   Q: 385  CAICQVEFRE-PLVLACQHVFCEECVCLW------FDTEKSCPLCR 423
           ********98.***************99*......**********8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

IFISTKRHLT MKMQRRHSSN ADSLPPERSR SQTVGSETSV DEGGVFEGLK PDTPSPQQMF 60
SGLAGLPSGT ITATPFQSGL VLGSSAGGGE VFIQMSSPRE EGAARSDNVQ YHHRQQHHHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTATTA GCACCAAGTT TAGTAAATCT GTTTAAACAT GTTTTATATG GTCCAATATG 60
TGAAAATGAA ACTGGTGGCA ATTAATTTTT TATAGTCTTG AGCGACAGGA CTAGATCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002361	Ailuropoda melanoleuca	73.68	2.00e-174	604.00
IUUC-Apl-003413	Anas platyrhynchos	77.57	0.00e+00	660.00
IUUC-Aca-005181	Anolis carolinensis	76.71	0.00e+00	672.00
IUUC-Aly-005949	Arabidopsis lyrata	32.65	4.00e-42	165.00
IUUC-Ath-007582	Arabidopsis thaliana	32.31	1.00e-43	170.00
IUUC-Ame-011821	Astyanax mexicanus	67.26	1.00e-172	599.00
IUUC-Bta-012475	Bos taurus	70.34	2.00e-175	608.00
IUUC-Bdi-014696	Brachypodium distachyon	31.63	6.00e-40	158.00
IUUC-Bol-015956	Brassica oleracea	32.33	4.00e-40	158.00
IUUC-Bra-016928	Brassica rapa	28.54	9.00e-43	167.00
IUUC-Cel-018190	Caenorhabditis elegans	25.59	6.00e-22	98.20
IUUC-Cja-019920	Callithrix jacchus	69.64	4.00e-166	577.00
IUUC-Cfa-020715	Canis familiaris	69.64	1.00e-173	602.00
IUUC-Cpo-021829	Cavia porcellus	67.48	1.00e-161	562.00
IUUC-Csa-023156	Chlorocebus sabaeus	79.40	8.00e-144	503.00
IUUC-Cho-025100	Choloepus hoffmanni	72.86	5.00e-168	583.00
IUUC-Dre-027857	Danio rerio	68.61	5.00e-173	600.00
IUUC-Dno-030046	Dasypus novemcinctus	71.81	2.00e-175	608.00
IUUC-Dor-030446	Dipodomys ordii	63.97	1.00e-85	310.00
IUUC-Eca-033852	Equus caballus	65.11	4.00e-165	573.00
IUUC-Fca-036281	Felis catus	68.89	1.00e-168	585.00
IUUC-Fal-037647	Ficedula albicollis	78.04	3.00e-140	490.00
IUUC-Gga-040867	Gallus gallus	79.63	0.00e+00	662.00
IUUC-Gma-043370	Glycine max	33.67	4.00e-40	158.00
IUUC-Hsa-046314	Homo sapiens	68.75	6.00e-164	570.00
IUUC-Hvu-047080	Hordeum vulgare	30.68	4.00e-33	134.00
IUUC-Lpe-051163	Leersia perrieri	31.29	1.00e-40	160.00
IUUC-Loc-051924	Lepisosteus oculatus	74.15	0.00e+00	646.00
IUUC-Laf-053448	Loxodonta africana	73.33	7.00e-176	609.00
IUUC-Mcc-054949	Macaca mulatta	80.07	1.00e-146	512.00
IUUC-Meu-056283	Macropus eugenii	56.95	1.00e-124	439.00
IUUC-Mtr-057979	Medicago truncatula	30.72	2.00e-41	163.00
IUUC-Mga-059843	Meleagris gallopavo	78.95	0.00e+00	656.00
IUUC-Mmr-061235	Microcebus murinus	77.92	4.00e-148	517.00
IUUC-Mdo-062268	Monodelphis domestica	76.15	0.00e+00	652.00
IUUC-Mmu-063985	Mus musculus	68.67	9.00e-180	622.00
IUUC-Mac-065493	Musa acuminata	32.42	3.00e-44	172.00
IUUC-Mpu-066469	Mustela putorius furo	69.64	4.00e-173	600.00
IUUC-Mlu-067707	Myotis lucifugus	67.33	2.00e-169	588.00
IUUC-Ont-072228	Oreochromis niloticus	67.56	3.00e-165	574.00
IUUC-Ocu-073985	Oryctolagus cuniculus	67.35	8.00e-164	569.00
IUUC-Oba-075245	Oryza barthii	31.47	3.00e-34	138.00
IUUC-Obr-076737	Oryza brachyantha	33.07	1.00e-30	126.00
IUUC-Ogl-077684	Oryza glaberrima	31.63	1.00e-40	160.00
IUUC-Ogu-078859	Oryza glumaepatula	31.63	1.00e-40	160.00
IUUC-Oin-079424	Oryza indica	31.97	9.00e-41	160.00
IUUC-Ome-081614	Oryza meridionalis	32.99	1.00e-36	147.00
IUUC-Oni-082296	Oryza nivara	32.99	3.00e-37	149.00
IUUC-Opu-083546	Oryza punctata	32.99	4.00e-37	149.00
IUUC-Oru-084510	Oryza rufipogon	32.99	5.00e-37	148.00
IUUC-Osa-085729	Oryza sativa	31.63	1.00e-40	160.00
IUUC-Ola-086621	Oryzias latipes	66.52	5.00e-157	547.00
IUUC-Olu-087799	Ostreococcus lucimarinus	37.50	9.00e-19	85.90
IUUC-Ptr-091587	Pan troglodytes	68.97	2.00e-164	572.00
IUUC-Pan-092883	Papio anubis	80.07	1.00e-146	512.00
IUUC-Psi-093826	Pelodiscus sinensis	77.35	0.00e+00	662.00
IUUC-Pfo-096621	Poecilia formosa	59.34	1.00e-152	533.00
IUUC-Pop-100001	Populus trichocarpa	32.45	5.00e-36	144.00
IUUC-Pca-100148	Procavia capensis	73.99	9.00e-160	556.00
IUUC-Ppe-101974	Prunus persica	33.67	4.00e-39	155.00
IUUC-Pva-102165	Pteropus vampyrus	71.65	1.00e-166	579.00
IUUC-Rno-105220	Rattus norvegicus	68.37	6.00e-179	619.00
IUUC-Smo-109529	Selaginella moellendorffii	31.97	1.00e-39	157.00
IUUC-Sit-110120	Setaria italica	31.97	6.00e-40	158.00
IUUC-Sly-111923	Solanum lycopersicum	30.61	7.00e-41	161.00
IUUC-Stu-112700	Solanum tuberosum	31.31	2.00e-34	139.00
IUUC-Sbi-114889	Sorghum bicolor	32.99	8.00e-37	147.00
IUUC-Ssc-115358	Sus scrofa	70.95	0.00e+00	627.00
IUUC-Tru-117949	Takifugu rubripes	65.78	5.00e-165	573.00
IUUC-Tni-120152	Tetraodon nigroviridis	68.17	2.00e-132	465.00
IUUC-Tca-121155	Theobroma cacao	31.97	6.00e-39	155.00
IUUC-Tae-124618	Triticum aestivum	30.95	1.00e-40	160.00
IUUC-Ttr-128557	Tursiops truncatus	70.72	1.00e-177	615.00
IUUC-Vvi-131323	Vitis vinifera	31.29	2.00e-35	143.00
IUUC-Xtr-132785	Xenopus tropicalis	65.98	4.00e-138	484.00
IUUC-Xma-133737	Xiphophorus maculatus	65.11	8.00e-161	559.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence