iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126861

Ensembl Protein ID

TRIUR3_28354-P1

UniProt Accession

M8A2M5; M8A2M5_TRIUA

Genbank Protein ID

EMS66597.1

Protein Name

Ubiquitin carboxyl-terminal hydrolase 23

Genbank Nucleotide ID

KD030332

Gene Name

TRIUR3_28354

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_28354	TRIUR3_28354-T1	TRIUR3_28354-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.40e-61	208.5	262	432

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 134  kkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenk.yycekckkkqeaekklklkkl 226
               +ksl++++F+g+l+sq+kc +c + s++++pfldlsl++ + +     +l  +L++ft+ e l+g +k y+ce+c++k+ a+k++++++ 
   Q: 262  ASAYEKSLVHRIFGGRLRSQVKCTRCSHCSNTFDPFLDLSLDIGKAT-----TLVRALQNFTEDELLDGGQKqYQCERCRQKVVAKKRFTIDQA 350
           556789****************************************9.....9**************987666********************* PP
   S: 227  PevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDsk 313
           P+vL++hLkRf  s     reki+kkv+f   Ldl+pf+++++ +   ++kY+L++v+vH G s++sGHY+++v+ ++g W ++dD++
   Q: 351  PNVLTVHLKRF--SPF-RPREKIDKKVDFQPVLDLKPFMSDSKGA---DYKYSLYGVLVHAGwSTQSGHYYCFVRTSSGMWHNLDDNQ 432
           ***********..454.5678*********99*********6655...8*************************************86 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MYHGVVSLRI DPIVGMPSHD NPTTMHEWNI YGFHLVVPLR GRLLIDPMTM TMSDEWHNLL 60
AFVVEDASLV VAPDVALHII VQGLATSAMV SSTGALPDLH RAGLRRIGDW AETRSTDVFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACCATG GTGTGGTCAG CCTTCGTATC GACCCGATTG TTGGGATGCC CAGTCACGAC 60
AATCCAACCA CAATGCATGA GTGGAACATC TATGGATTCC ATTTGGTTGT CCCGCTCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000845	Aegilops tauschii	86.59	0.00e+00	1380.00
IUUC-Bdi-014036	Brachypodium distachyon	63.45	0.00e+00	979.00
IUUC-Lpe-051574	Leersia perrieri	55.56	0.00e+00	818.00
IUUC-Oba-075866	Oryza barthii	57.21	0.00e+00	837.00
IUUC-Obr-076408	Oryza brachyantha	56.04	0.00e+00	849.00
IUUC-Ogl-077239	Oryza glaberrima	57.21	0.00e+00	838.00
IUUC-Ogu-078064	Oryza glumaepatula	57.21	0.00e+00	849.00
IUUC-Oin-079157	Oryza indica	56.86	0.00e+00	834.00
IUUC-Olo-080633	Oryza longistaminata	55.48	0.00e+00	770.00
IUUC-Ome-081746	Oryza meridionalis	57.65	0.00e+00	855.00
IUUC-Oni-082339	Oryza nivara	56.98	0.00e+00	836.00
IUUC-Opu-083194	Oryza punctata	57.41	0.00e+00	835.00
IUUC-Oru-085083	Oryza rufipogon	56.98	0.00e+00	839.00
IUUC-Osa-086180	Oryza sativa	56.98	0.00e+00	837.00
IUUC-Sit-109895	Setaria italica	52.82	0.00e+00	749.00
IUUC-Sbi-114477	Sorghum bicolor	52.68	0.00e+00	753.00
IUUC-Tae-125416	Triticum aestivum	91.68	0.00e+00	1474.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence