iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__1137__AT3G47820.1	fgenesh2_kg.5__1137__AT3G47820.1	fgenesh2_kg.5__1137__AT3G47820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-19	69.7	10	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p eflCpI++ lM+dPvv++sG+t++r s++ + + g      ++++ + ++++Pnl+++++i +wc++n+ 
   Q: 10   TPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLGFAPKLHDGTQPDLSTVIPNLAMKSTILSWCDRNKM 82
           799*************************************999***************************985 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPQHNSPGET PTEFLCPITG FLMSDPVVVA SGQTFERISV QVCRNLGFAP KLHDGTQPDL 60
STVIPNLAMK STILSWCDRN KMEHPRPPDY AYVEGVVRTR MDSIPPGTGH RIAKSEILPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTATGCCACA ACACAACAGC CCCGGCGAAA CTCCGACAGA GTTCCTCTGC CCCATCACCG 60
GATTCTTGAT GTCAGACCCC GTCGTCGTCG CTTCAGGTCA AACATTTGAA CGTATCTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_485145

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006704	Arabidopsis thaliana	96.09	0.00e+00	841.00
IUUC-Bol-015684	Brassica oleracea	85.28	0.00e+00	748.00
IUUC-Lpe-050893	Leersia perrieri	35.52	7.00e-55	207.00
IUUC-Sit-109782	Setaria italica	35.70	8.00e-56	210.00
IUUC-Sbi-113814	Sorghum bicolor	35.38	8.00e-49	187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence