iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131502

UUCD1 version

UUC-ViV-00686

Ensembl Protein ID

VIT_01s0010g00710.t01

UniProt Accession

F6HGF4; F6HGF4_VITVI

Genbank Protein ID

CCB51155.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595754

Gene Name

VIT_01s0010g00710

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0010g00710	VIT_01s0010g00710.t01	VIT_01s0010g00710.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.90e-24	84.3	5	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceens 73
           +e f Cp+++++M+dPv+++sG+ty+r++I +w++++++     cP t+q+l+++ l  n++l+ +i++w e+n+
   Q: 5    YETFFCPLTKNIMEDPVTIESGVTYERKAITEWFEKYNNsaeiCCPATGQKLRSKGLSTNIALKTTIEEWKERNE 79
           789*******************************999999999****************************9997 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEPFYETFFC PLTKNIMEDP VTIESGVTYE RKAITEWFEK YNNSAEICCP ATGQKLRSKG 60
LSTNIALKTT IEEWKERNEA ARIKVARAAL SLAISESMVL EALNDLQSIC GRKPYNKVQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCCTT TCTATGAGAC TTTCTTTTGC CCACTGACAA AGAATATCAT GGAAGACCCA 60
GTGACCATAG AAAGTGGAGT TACTTATGAA AGGAAAGCAA TTACTGAATG GTTCGAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR021133--HEAT_type_2
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS50077--HEAT_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	44.64	1.00e-179	622.00
IUUC-Atr-002664	Amborella trichopoda	51.01	0.00e+00	696.00
IUUC-Aly-006424	Arabidopsis lyrata	58.39	0.00e+00	940.00
IUUC-Ath-006596	Arabidopsis thaliana	58.47	0.00e+00	886.00
IUUC-Bdi-014572	Brachypodium distachyon	47.32	0.00e+00	692.00
IUUC-Bol-016179	Brassica oleracea	57.12	0.00e+00	894.00
IUUC-Bra-017617	Brassica rapa	57.12	0.00e+00	891.00
IUUC-Hvu-047800	Hordeum vulgare	47.69	0.00e+00	662.00
IUUC-Lpe-050817	Leersia perrieri	46.09	0.00e+00	691.00
IUUC-Mac-065538	Musa acuminata	52.45	0.00e+00	753.00
IUUC-Oba-075004	Oryza barthii	45.47	0.00e+00	693.00
IUUC-Obr-076391	Oryza brachyantha	44.43	6.00e-172	597.00
IUUC-Ogl-077375	Oryza glaberrima	45.47	0.00e+00	693.00
IUUC-Ogu-078488	Oryza glumaepatula	45.59	0.00e+00	698.00
IUUC-Oin-079369	Oryza indica	45.80	0.00e+00	698.00
IUUC-Olo-080998	Oryza longistaminata	44.58	0.00e+00	645.00
IUUC-Ome-081243	Oryza meridionalis	45.47	0.00e+00	692.00
IUUC-Oni-082268	Oryza nivara	45.59	0.00e+00	699.00
IUUC-Opu-083388	Oryza punctata	46.80	0.00e+00	713.00
IUUC-Oru-084387	Oryza rufipogon	45.34	0.00e+00	696.00
IUUC-Osa-086255	Oryza sativa	45.80	0.00e+00	699.00
IUUC-Pop-099123	Populus trichocarpa	68.69	0.00e+00	1044.00
IUUC-Ppe-101776	Prunus persica	70.28	0.00e+00	1077.00
IUUC-Sit-110322	Setaria italica	47.65	0.00e+00	669.00
IUUC-Sly-111047	Solanum lycopersicum	61.13	0.00e+00	988.00
IUUC-Stu-112113	Solanum tuberosum	60.13	0.00e+00	984.00
IUUC-Sbi-113818	Sorghum bicolor	46.02	0.00e+00	663.00
IUUC-Tca-121365	Theobroma cacao	70.16	0.00e+00	1083.00
IUUC-Tae-123677	Triticum aestivum	47.57	0.00e+00	656.00
IUUC-Tur-126161	Triticum urartu	47.19	0.00e+00	650.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence