iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098860

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_571937; POPTR_0013s15600g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s15600	POPTR_0013s15600.1	POPTR_0013s15600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.5	387	425

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e +   p++l+C+H+f++dC+  w        +e +CPlCr
   Q: 387  CAICQEKMHA-PILLRCKHIFCEDCVSEW------FDRERTCPLCR 425
           ********99.999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEICGEGNSG EIYRNSSLGS SSVGGGGDGY SNNPRRYGIN IAASNLIHAP LTTLLEYSGI 60
LGGSTSSYSQ EREQLISSPS TATGGGGGHQ EVTIRIIGSA ENDHDDEPNA SPNVEALPYG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAGCTTATG TTTCCCTGTC TGATCATCAA CTCAGCTCTG CAGGAAAAGC CCTATCCTCT 60
TCCTCTCCTT CTCCCAATCC TAATCAAGAT AAAATCAGAG AAAAGGTCAG ATTTCAGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0013s15600g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002361	Ailuropoda melanoleuca	29.39	3.00e-34	138.00
IUUC-Aca-005181	Anolis carolinensis	28.29	9.00e-34	137.00
IUUC-Aly-005949	Arabidopsis lyrata	63.27	1.00e-144	505.00
IUUC-Ath-007582	Arabidopsis thaliana	65.00	5.00e-150	523.00
IUUC-Ame-011821	Astyanax mexicanus	30.51	2.00e-38	152.00
IUUC-Bdi-014696	Brachypodium distachyon	61.41	5.00e-138	483.00
IUUC-Bol-015956	Brassica oleracea	63.08	5.00e-143	500.00
IUUC-Bra-016928	Brassica rapa	62.38	1.00e-140	492.00
IUUC-Cel-018190	Caenorhabditis elegans	27.23	1.00e-17	84.00
IUUC-Csa-023752	Chlorocebus sabaeus	27.78	1.00e-34	140.00
IUUC-Dse-031284	Dothistroma septosporum	38.81	6.00e-11	60.80
IUUC-Ete-032456	Echinops telfairi	35.53	8.00e-31	127.00
IUUC-Eeu-034649	Erinaceus europaeus	51.11	1.00e-10	60.50
IUUC-Gga-040867	Gallus gallus	30.41	3.00e-36	145.00
IUUC-Gac-042530	Gasterosteus aculeatus	25.66	1.00e-26	114.00
IUUC-Ggo-045577	Gorilla gorilla	27.21	2.00e-33	136.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	26.27	2.00e-33	136.00
IUUC-Lch-049516	Latimeria chalumnae	29.87	3.00e-33	135.00
IUUC-Lpe-051163	Leersia perrieri	62.56	4.00e-140	490.00
IUUC-Loc-052692	Lepisosteus oculatus	26.60	2.00e-30	125.00
IUUC-Mga-059843	Meleagris gallopavo	30.41	2.00e-36	145.00
IUUC-Mmu-063985	Mus musculus	28.91	2.00e-33	136.00
IUUC-Mlu-067707	Myotis lucifugus	29.10	5.00e-34	138.00
IUUC-Nle-069009	Nomascus leucogenys	27.96	7.00e-34	137.00
IUUC-Ont-072228	Oreochromis niloticus	29.39	7.00e-36	144.00
IUUC-Oan-073490	Ornithorhynchus anatinus	31.88	2.00e-33	136.00
IUUC-Ocu-074346	Oryctolagus cuniculus	28.16	2.00e-34	139.00
IUUC-Ogl-077684	Oryza glaberrima	75.93	4.00e-136	477.00
IUUC-Ogu-078859	Oryza glumaepatula	75.93	4.00e-136	477.00
IUUC-Oin-079424	Oryza indica	76.27	5.00e-136	477.00
IUUC-Oru-085138	Oryza rufipogon	74.22	1.00e-129	456.00
IUUC-Osa-085729	Oryza sativa	75.93	4.00e-136	477.00
IUUC-Oga-087950	Otolemur garnettii	31.63	1.00e-33	136.00
IUUC-Oar-089816	Ovis aries	29.77	3.00e-32	132.00
IUUC-Pfo-097090	Poecilia formosa	32.06	1.00e-28	120.00
IUUC-Pab-098474	Pongo abelii	28.65	4.00e-34	138.00
IUUC-Ppe-101186	Prunus persica	61.82	2.00e-134	471.00
IUUC-Rno-105220	Rattus norvegicus	28.38	1.00e-32	133.00
IUUC-Sha-107537	Sarcophilus harrisii	29.33	8.00e-34	137.00
IUUC-Smo-109529	Selaginella moellendorffii	52.76	5.00e-111	394.00
IUUC-Sit-110120	Setaria italica	61.26	4.00e-137	480.00
IUUC-Sly-111923	Solanum lycopersicum	58.51	5.00e-137	480.00
IUUC-Stu-112700	Solanum tuberosum	59.04	1.00e-122	432.00
IUUC-Sar-113494	Sorex araneus	50.00	6.00e-20	91.30
IUUC-Sbi-114889	Sorghum bicolor	60.14	2.00e-130	458.00
IUUC-Tru-117949	Takifugu rubripes	29.25	2.00e-36	146.00
IUUC-Tsy-118995	Tarsius syrichta	29.49	1.00e-29	123.00
IUUC-Tae-124755	Triticum aestivum	61.17	5.00e-142	497.00
IUUC-Tme-126916	Tuber melanosporum	40.38	8.00e-09	55.50
IUUC-Tbe-128158	Tupaia belangeri	51.11	2.00e-10	59.30
IUUC-Vpa-130045	Vicugna pacos	39.80	3.00e-18	85.50
IUUC-Xtr-132785	Xenopus tropicalis	28.43	6.00e-34	137.00
IUUC-Xma-134146	Xiphophorus maculatus	31.58	8.00e-29	120.00
IUUC-Yli-134581	Yarrowia lipolytica	51.28	8.00e-09	53.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence