iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113948

Ensembl Protein ID

Sb03g010680.1

UniProt Accession

C5XGL6; C5XGL6_SORBI

Genbank Protein ID

EES00551.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G126300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g010680	Sb03g010680.1	Sb03g010680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.50e-08	33.3	252	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
           e+ ++ lv+MGFd++ a+qaL +a n++++A++ Ll+
   Q: 252  ESSVAMLVSMGFDDNNARQALVRARNDINVATNILLE 288
           899********************************96 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQGGVSGFQN APVTRAVVLA SGLLSVVFSA QRRARALGIS YQDTITNFRL WKIFPSVFAF 60
QSTPELMFGL YLLYYFRVFE RQIGSNKYSV FCLFTITASS LLEILSLVIL KDTNYISTLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGTAAACA AGGCCCCCGT ACAAGAATCC GTCTAGAGAA GTGAGCTACT CCGGCACGGC 60
GGAGACTCCA AGTCACGAAG CATCCGCGGC GCAGCCCAAC CAACCAGGGC ACCACACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity
GO:0043130--F:ubiquitin binding

KEGG

sbi:SORBI_03g010680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002884	Amborella trichopoda	59.81	5.00e-64	236.00
IUUC-Aly-006411	Arabidopsis lyrata	63.61	5.00e-97	346.00
IUUC-Ath-007083	Arabidopsis thaliana	64.63	4.00e-102	363.00
IUUC-Bgr-012021	Blumeria graminis	28.71	1.00e-13	69.30
IUUC-Bci-013918	Botrytis cinerea	27.84	1.00e-16	79.00
IUUC-Bdi-014098	Brachypodium distachyon	86.55	2.00e-117	414.00
IUUC-Bol-015531	Brassica oleracea	58.53	1.00e-85	308.00
IUUC-Bra-017340	Brassica rapa	63.61	6.00e-93	332.00
IUUC-Cre-022898	Chlamydomonas reinhardtii	38.46	9.00e-27	113.00
IUUC-Cgl-026433	Colletotrichum gloeosporioides	30.00	2.00e-15	75.50
IUUC-Dse-031426	Dothistroma septosporum	30.00	3.00e-11	61.20
IUUC-Ete-032599	Echinops telfairi	28.35	8.00e-14	70.50
IUUC-Eca-034280	Equus caballus	27.36	9.00e-22	96.70
IUUC-Fal-036680	Ficedula albicollis	25.80	3.00e-23	101.00
IUUC-Fox-037932	Fusarium oxysporum	26.13	4.00e-14	70.90
IUUC-Fso-038343	Fusarium solani	29.15	2.00e-12	65.10
IUUC-Gmo-039606	Gadus morhua	31.34	5.00e-14	70.90
IUUC-Ggr-039926	Gaeumannomyces graminis	27.67	1.00e-14	72.40
IUUC-Gac-041765	Gasterosteus aculeatus	28.62	3.00e-15	75.10
IUUC-Gma-043400	Glycine max	62.17	3.00e-97	347.00
IUUC-Hvu-047737	Hordeum vulgare	84.83	7.00e-128	449.00
IUUC-Itr-048679	Ictidomys tridecemlineatus	33.93	5.00e-09	52.80
IUUC-Lpe-050798	Leersia perrieri	82.76	8.00e-113	399.00
IUUC-Mor-057083	Magnaporthe oryzae	24.88	2.00e-11	62.00
IUUC-Mpo-057326	Magnaporthe poae	28.92	4.00e-14	70.90
IUUC-Mtr-057918	Medicago truncatula	62.24	1.00e-100	358.00
IUUC-Mla-058868	Melampsora laricipopulina	28.63	1.00e-12	65.90
IUUC-Mmu-063305	Mus musculus	26.51	3.00e-18	85.10
IUUC-Mac-065255	Musa acuminata	59.45	6.00e-94	336.00
IUUC-Mlu-067419	Myotis lucifugus	27.40	2.00e-12	64.70
IUUC-Ncr-068703	Neurospora crassa	27.83	1.00e-15	75.50
IUUC-Oba-075447	Oryza barthii	83.22	1.00e-125	441.00
IUUC-Obr-076812	Oryza brachyantha	83.22	2.00e-114	404.00
IUUC-Ogu-078221	Oryza glumaepatula	83.56	2.00e-117	414.00
IUUC-Oin-080171	Oryza indica	76.73	3.00e-113	400.00
IUUC-Ome-081856	Oryza meridionalis	82.19	2.00e-110	390.00
IUUC-Oni-082795	Oryza nivara	83.56	2.00e-117	414.00
IUUC-Opu-083755	Oryza punctata	83.22	2.00e-112	397.00
IUUC-Oru-084198	Oryza rufipogon	83.56	2.00e-117	414.00
IUUC-Osa-085870	Oryza sativa	83.56	2.00e-117	414.00
IUUC-Ola-086714	Oryzias latipes	27.47	2.00e-08	52.40
IUUC-Olu-087791	Ostreococcus lucimarinus	30.21	9.00e-16	76.30
IUUC-Oar-090421	Ovis aries	25.73	3.00e-18	85.10
IUUC-Ppa-095918	Physcomitrella patens	54.45	2.00e-77	281.00
IUUC-Pfo-096398	Poecilia formosa	26.35	3.00e-13	68.60
IUUC-Pop-098933	Populus trichocarpa	62.24	3.00e-99	353.00
IUUC-Ppe-101164	Prunus persica	65.87	2.00e-108	384.00
IUUC-Pgr-103488	Puccinia graminis	22.22	4.00e-12	63.90
IUUC-Pte-104413	Pyrenophora teres	27.59	7.00e-06	43.50
IUUC-Pyt-104659	Pyrenophora triticirepentis	27.59	1.00e-05	42.70
IUUC-Rno-105226	Rattus norvegicus	27.04	4.00e-19	88.20
IUUC-Sja-107960	Schizosaccharomyces japonicus	23.23	4.00e-13	67.80
IUUC-Spo-108285	Schizosaccharomyces pombe	25.16	9.00e-13	67.00
IUUC-Ssl-108440	Sclerotinia sclerotiorum	27.84	6.00e-19	87.00
IUUC-Smo-108964	Selaginella moellendorffii	53.14	1.00e-66	245.00
IUUC-Sit-109805	Setaria italica	95.21	2.00e-134	470.00
IUUC-Sly-111445	Solanum lycopersicum	58.31	5.00e-91	326.00
IUUC-Stu-112541	Solanum tuberosum	59.32	2.00e-91	328.00
IUUC-Tru-118110	Takifugu rubripes	27.07	2.00e-18	85.50
IUUC-Tni-119811	Tetraodon nigroviridis	31.50	8.00e-23	100.00
IUUC-Tca-121053	Theobroma cacao	64.29	3.00e-100	357.00
IUUC-Tre-122152	Trichoderma reesei	29.41	2.00e-13	68.20
IUUC-Tvi-122334	Trichoderma virens	28.36	4.00e-13	67.40
IUUC-Tae-124394	Triticum aestivum	84.14	3.00e-132	463.00
IUUC-Tur-126165	Triticum urartu	85.00	3.00e-78	283.00
IUUC-Tme-127059	Tuber melanosporum	26.73	2.00e-16	78.60
IUUC-Tbe-127867	Tupaia belangeri	43.55	1.00e-06	46.60
IUUC-Vda-129740	Verticillium dahliae	26.67	1.00e-13	68.90
IUUC-Vvi-131299	Vitis vinifera	64.07	9.00e-103	365.00
IUUC-Xtr-132867	Xenopus tropicalis	29.82	6.00e-20	90.90
IUUC-Yli-134415	Yarrowia lipolytica	26.34	5.00e-11	60.50
IUUC-Zma-135390	Zea mays	97.60	9.00e-140	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence