iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099205

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_641460; POPTR_0001s28270g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s28270	POPTR_0001s28270.1	POPTR_0001s28270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-07	30.6	40	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+ +  ++  lv +C H+++ +C+ +w    +   k+ +CP C+
   Q: 40   CAICLDKIvlQETALVKGCEHAYCVTCILRW----STYTKNPTCPQCK 83
           ******998855588999*************....88999*******6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDGISEVIGE LNLSGFRFQG EMESKVESSE RACGNHGGIC AICLDKIVLQ ETALVKGCEH 60
AYCVTCILRW STYTKNPTCP QCKHPFEFLN IHRSLDGSIQ DYMFEESVCL LLRASWFMTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTTAAAA TTCTGGGTTT TTGTTATTAC GGAGAATCAA GAAGAAATTG AAGGAGTAGA 60
TGAATCCCAT GTTGTTGTTT TTTGTCTGGT AATTGAATTC TTAGTAAACA AAACGTTAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0001s28270g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002853	Amborella trichopoda	57.07	2.00e-50	191.00
IUUC-Aly-006143	Arabidopsis lyrata	56.30	4.00e-55	207.00
IUUC-Ath-007240	Arabidopsis thaliana	60.75	2.00e-55	208.00
IUUC-Bdi-014704	Brachypodium distachyon	61.96	7.00e-48	183.00
IUUC-Bol-015219	Brassica oleracea	50.20	1.00e-56	212.00
IUUC-Cpo-021419	Cavia porcellus	32.79	6.00e-07	50.10
IUUC-Cre-022875	Chlamydomonas reinhardtii	60.00	1.00e-26	110.00
IUUC-Csa-023947	Chlorocebus sabaeus	31.15	2.00e-06	48.50
IUUC-Cho-024396	Choloepus hoffmanni	31.82	8.00e-07	49.70
IUUC-Cme-027236	Cyanidioschyzon merolae	32.93	5.00e-08	50.40
IUUC-Dno-029714	Dasypus novemcinctus	36.00	1.00e-06	48.90
IUUC-Lpe-050939	Leersia perrieri	59.05	2.00e-57	214.00
IUUC-Oba-075008	Oryza barthii	60.39	1.00e-55	209.00
IUUC-Obr-076867	Oryza brachyantha	60.48	2.00e-56	211.00
IUUC-Ogl-077681	Oryza glaberrima	60.87	4.00e-56	210.00
IUUC-Ogu-078356	Oryza glumaepatula	60.87	4.00e-56	210.00
IUUC-Oin-079949	Oryza indica	60.87	4.00e-56	210.00
IUUC-Olo-080990	Oryza longistaminata	60.39	3.00e-55	207.00
IUUC-Ome-081618	Oryza meridionalis	60.87	3.00e-56	211.00
IUUC-Oni-082491	Oryza nivara	60.87	4.00e-56	210.00
IUUC-Opu-083979	Oryza punctata	56.80	2.00e-53	201.00
IUUC-Osa-085324	Oryza sativa	60.87	4.00e-56	210.00
IUUC-Olu-087720	Ostreococcus lucimarinus	31.58	1.00e-13	69.70
IUUC-Ppe-101850	Prunus persica	70.54	2.00e-77	281.00
IUUC-Sit-110148	Setaria italica	64.20	1.00e-53	202.00
IUUC-Sly-110879	Solanum lycopersicum	67.11	2.00e-68	251.00
IUUC-Stu-112540	Solanum tuberosum	67.56	6.00e-69	253.00
IUUC-Sbi-114796	Sorghum bicolor	62.58	3.00e-45	174.00
IUUC-Tca-121633	Theobroma cacao	70.21	3.00e-73	267.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence