iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114841

Ensembl Protein ID

Sb03g028750.1

UniProt Accession

A0A1B6Q4T6; A0A1B6Q4T6_SORBI

Genbank Protein ID

KXG32939.1; KXG32940.1; KXG32941.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762; CM000762; CM000762

Gene Name

SORBI_003G229500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g028750	Sb03g028750.1	Sb03g028750.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	27.14	3.00e-09	61.60	IUUC-Dme-031764

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGFDNECILS IQSLPGEYFC PVCRTLVYPN EALQTQCTHL YCKSCLAYVV ATTQACPYDG 60
YLVTEADSKP LMESNKTLAE TIGKVAVYCL YNKSGCQWHG ELSACITHGA TCAYGNSPVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCGGATCG GCTCCCCCTC GGCGGCGTCC AGCGACGGAG GGGCAGTCCC AGGCTCGGCG 60
GCGGCGTCGG CGGCTCCCCC TCCCGCCTCT CGCCAGTCGC CTCGTGCCCT CGCCTCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000744	Aegilops tauschii	86.84	3.00e-80	293.00
IUUC-Atr-002634	Amborella trichopoda	72.19	4.00e-67	249.00
IUUC-Ame-011530	Astyanax mexicanus	28.10	3.00e-08	52.00
IUUC-Bci-013998	Botrytis cinerea	31.94	2.00e-08	53.10
IUUC-Bdi-014617	Brachypodium distachyon	42.99	6.00e-84	305.00
IUUC-Bol-016391	Brassica oleracea	55.36	3.00e-52	199.00
IUUC-Dre-028193	Danio rerio	28.10	2.00e-08	53.10
IUUC-Dme-031764	Drosophila melanogaster	27.14	3.00e-11	61.60
IUUC-Eeu-035308	Erinaceus europaeus	28.79	4.00e-08	51.20
IUUC-Fal-037150	Ficedula albicollis	22.76	1.00e-08	53.10
IUUC-Gmo-038860	Gadus morhua	27.27	8.00e-08	50.80
IUUC-Gac-041489	Gasterosteus aculeatus	27.27	1.00e-07	50.40
IUUC-Gma-043859	Glycine max	76.87	9.00e-71	261.00
IUUC-Hvu-047095	Hordeum vulgare	87.50	2.00e-81	296.00
IUUC-Lpe-050771	Leersia perrieri	77.91	1.00e-78	287.00
IUUC-Loc-052312	Lepisosteus oculatus	26.19	1.00e-08	53.50
IUUC-Mtr-057807	Medicago truncatula	78.17	4.00e-71	262.00
IUUC-Mac-064547	Musa acuminata	83.92	6.00e-76	278.00
IUUC-Ont-071518	Oreochromis niloticus	27.27	1.00e-07	50.40
IUUC-Oba-075596	Oryza barthii	38.88	2.00e-86	313.00
IUUC-Ogl-077360	Oryza glaberrima	80.46	1.00e-82	300.00
IUUC-Ogu-078462	Oryza glumaepatula	38.53	2.00e-86	313.00
IUUC-Oin-079887	Oryza indica	37.61	9.00e-82	298.00
IUUC-Ome-082014	Oryza meridionalis	38.31	2.00e-85	310.00
IUUC-Oni-083105	Oryza nivara	38.89	4.00e-87	315.00
IUUC-Opu-083191	Oryza punctata	39.18	8.00e-84	304.00
IUUC-Oru-084831	Oryza rufipogon	38.73	7.00e-86	311.00
IUUC-Ola-086674	Oryzias latipes	27.27	1.00e-07	50.80
IUUC-Pfo-096912	Poecilia formosa	30.77	2.00e-09	56.60
IUUC-Pop-099390	Populus trichocarpa	75.97	1.00e-71	264.00
IUUC-Ppe-101708	Prunus persica	77.78	3.00e-74	273.00
IUUC-Ssl-108580	Sclerotinia sclerotiorum	31.94	2.00e-08	52.80
IUUC-Sit-110103	Setaria italica	69.24	0.00e+00	663.00
IUUC-Sly-111800	Solanum lycopersicum	64.29	3.00e-63	236.00
IUUC-Tru-117602	Takifugu rubripes	28.10	2.00e-08	52.80
IUUC-Tca-121454	Theobroma cacao	78.47	1.00e-70	261.00
IUUC-Tae-123531	Triticum aestivum	86.84	1.00e-80	294.00
IUUC-Tur-126325	Triticum urartu	86.84	1.00e-80	294.00
IUUC-Vvi-131592	Vitis vinifera	82.52	1.00e-74	274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence