iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057748

Ensembl Protein ID

KEH39885

UniProt Accession

A0A072VP49; A0A072VP49_MEDTR

Genbank Protein ID

KEH39885.1

Protein Name

Ubiquitin carboxy-terminal hydrolase

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g014680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g014680	KEH39885	KEH39885

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-73	249.8	181	486

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflafll 100
           +Gl N gN+C+ N vLQcLs++++l  +lle  +++++     + ++ ++l+++++ +e     +++a+sp ++l+ l ++   +   +q+Da+Ef++f +
   Q: 181  CGLLNCGNSCFANVVLQCLSFTRPLVAYLLEkGHRNEC-----TCNDWCFLCEFESHVERA-RLSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSI 275
           7******************************3333333.....56788**********999.88999********************************** PP
   S: 101  dqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeele 201
           d++++ +         +e++ +       +    + +++++i+++F+g+l+s+++c +cd++s+++e+++dl+++++g+      sl++cL++ft +e l+
   Q: 276  DTMQSVC--------LDEFGGE-------KAVPSNLQETTIIQHIFGGRLQSEVICTKCDKTSNQYESMMDLTVEIHGDAA----SLEECLDQFTVKEWLD 357
           *******........3344444.......678899999******************************************6....8*************** PP
   S: 202  genkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslss...GHYvayv 299
           gen+y+ce c+++++a k+l++k  P++L++ LkRf    + ++  k+nk+v fp++L+lsp++++  ++   +++Y+L+avvvH   l+    GHY++y+
   Q: 358  GENMYKCEGCQDYVKAWKRLTVKCAPNILTIALKRF----QSGRFGKLNKRVAFPETLNLSPYMSEAGDG---SDIYNLYAVVVHIDMLNAsffGHYICYI 451
           ************************************....346668********************7766...79***********95554455******* PP
   S: 300  knekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           k+ +g+W+++dDskV  v+ eevl+   + aY+l+Y+r
   Q: 452  KDFRGNWYRIDDSKVVCVELEEVLS---QGAYMLLYRR 486
           *************************...********98 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MLVIAGVSWD LNRFLQFIFT ALVIAIGLHT LVKNTASKYF EVDANFEGDH HPSSPTSPMP 60
GVLNSDEPVC AVCASHATKK CSRCKGVRYC TTKCQQSHWN SGHKEKCKSN SGANVFNSAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCTATAGA ACAGAAGAAA TAATAGAAAG TAATAGAGAA CTGAGAAGAA GTGATTCTAA 60
TTTAGATTGT GATTGTGATT GTGATTTGGG GAAAAATTGA AAAGAAAGAA AACCCTAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_1g014680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	66.22	2.00e-147	516.00
IUUC-Atr-002997	Amborella trichopoda	52.30	5.00e-159	554.00
IUUC-Aly-005942	Arabidopsis lyrata	62.90	6.00e-179	620.00
IUUC-Ath-007334	Arabidopsis thaliana	63.16	0.00e+00	676.00
IUUC-Bdi-014660	Brachypodium distachyon	62.16	3.00e-156	545.00
IUUC-Bol-016021	Brassica oleracea	61.47	0.00e+00	651.00
IUUC-Bra-017569	Brassica rapa	62.94	0.00e+00	644.00
IUUC-Gma-042920	Glycine max	78.78	0.00e+00	951.00
IUUC-Hvu-047620	Hordeum vulgare	63.89	7.00e-163	567.00
IUUC-Lpe-051385	Leersia perrieri	48.42	1.00e-137	483.00
IUUC-Mac-065204	Musa acuminata	62.16	3.00e-176	610.00
IUUC-Oba-075131	Oryza barthii	66.42	9.00e-155	540.00
IUUC-Obr-076763	Oryza brachyantha	66.28	3.00e-165	575.00
IUUC-Ogl-077264	Oryza glaberrima	66.04	2.00e-165	575.00
IUUC-Ogu-078646	Oryza glumaepatula	66.04	7.00e-165	574.00
IUUC-Oin-079613	Oryza indica	63.32	1.00e-153	536.00
IUUC-Olo-080250	Oryza longistaminata	66.04	3.00e-165	575.00
IUUC-Ome-081416	Oryza meridionalis	66.05	4.00e-165	575.00
IUUC-Oni-082102	Oryza nivara	65.81	7.00e-164	570.00
IUUC-Opu-083135	Oryza punctata	65.58	3.00e-164	572.00
IUUC-Oru-084644	Oryza rufipogon	66.04	9.00e-165	573.00
IUUC-Osa-086195	Oryza sativa	66.25	6.00e-156	544.00
IUUC-Ppa-095936	Physcomitrella patens	56.48	5.00e-136	478.00
IUUC-Pop-099611	Populus trichocarpa	69.83	0.00e+00	730.00
IUUC-Ppe-101845	Prunus persica	74.08	0.00e+00	699.00
IUUC-Smo-109625	Selaginella moellendorffii	53.73	6.00e-142	497.00
IUUC-Sit-109798	Setaria italica	63.72	9.00e-169	587.00
IUUC-Sly-111333	Solanum lycopersicum	63.06	0.00e+00	706.00
IUUC-Stu-112696	Solanum tuberosum	62.13	6.00e-127	446.00
IUUC-Sbi-113982	Sorghum bicolor	62.11	3.00e-164	572.00
IUUC-Tca-121521	Theobroma cacao	56.38	0.00e+00	757.00
IUUC-Tae-125225	Triticum aestivum	55.77	5.00e-160	558.00
IUUC-Tur-126423	Triticum urartu	66.22	1.00e-147	516.00
IUUC-Vvi-130927	Vitis vinifera	66.73	0.00e+00	692.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence