iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095664

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544979

Gene Name

PHYPADRAFT_131736

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S90_96V6	PP1S90_96V6.1	PP1S90_96V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.70e-08	35.3	326	370

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +Cge+g++   ++eC++C   +H +Cl ++  ee+p+ + w+Cp C+
   Q: 326  CVLCGENGQSI--MLECDECLGGYHLRCLDPP-LEEVPEGD-WMCPVCS 370
           *********65..*******************.*******7.******7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MTSPLVEGKM GTGGSPRTKE ACIGSPINVG VDVVEPQPRR KCPESSLKQA LRGARMRGSL 60
NVTLESPKAI QLPNPLNDGP SSSLKQTLKR ARERGTLDAG LESNPGKSPR LDYVRNTAAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGAGCC CGTTGGTGGA GGGGAAGATG GGGACAGGCG GGTCCCCTAG GACGAAAGAA 60
GCTTGTATTG GCTCGCCAAT TAATGTTGGG GTGGATGTCG TTGAGCCTCA ACCGCGGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003593--AAA+_ATPase
IPR003959--ATPase_AAA_core
IPR001025--BAH_dom
IPR027417--P-loop_NTPase
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00004--AAA
PF01426--BAH
PF00628--PHD

SMART

SM00382--AAA
SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_131736

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002930	Amborella trichopoda	42.04	0.00e+00	637.00
IUUC-Aly-005695	Arabidopsis lyrata	47.13	0.00e+00	654.00
IUUC-Ath-007442	Arabidopsis thaliana	45.99	1.00e-180	626.00
IUUC-Bol-016257	Brassica oleracea	49.20	0.00e+00	661.00
IUUC-Bra-017118	Brassica rapa	49.06	0.00e+00	657.00
IUUC-Cre-022831	Chlamydomonas reinhardtii	45.63	2.00e-47	184.00
IUUC-Gma-044341	Glycine max	47.46	0.00e+00	691.00
IUUC-Hvu-047826	Hordeum vulgare	46.88	1.00e-143	503.00
IUUC-Lpe-051030	Leersia perrieri	47.31	3.00e-170	591.00
IUUC-Mtr-058324	Medicago truncatula	48.76	0.00e+00	660.00
IUUC-Mac-065599	Musa acuminata	45.65	0.00e+00	682.00
IUUC-Oba-075586	Oryza barthii	46.41	1.00e-161	563.00
IUUC-Obr-076569	Oryza brachyantha	46.88	3.00e-169	588.00
IUUC-Ogl-077597	Oryza glaberrima	46.92	3.00e-171	594.00
IUUC-Ogu-078194	Oryza glumaepatula	46.33	3.00e-163	568.00
IUUC-Olo-080478	Oryza longistaminata	46.21	9.00e-168	583.00
IUUC-Ome-081900	Oryza meridionalis	44.83	2.00e-172	598.00
IUUC-Oni-082028	Oryza nivara	43.54	1.00e-133	470.00
IUUC-Oru-085084	Oryza rufipogon	46.47	5.00e-164	571.00
IUUC-Pop-099691	Populus trichocarpa	45.32	0.00e+00	667.00
IUUC-Ppe-102108	Prunus persica	49.66	0.00e+00	661.00
IUUC-Smo-109166	Selaginella moellendorffii	49.67	0.00e+00	661.00
IUUC-Sit-110797	Setaria italica	47.57	3.00e-171	595.00
IUUC-Tca-121730	Theobroma cacao	49.00	0.00e+00	660.00
IUUC-Tae-123333	Triticum aestivum	47.04	9.00e-175	606.00
IUUC-Vvi-130915	Vitis vinifera	48.71	0.00e+00	644.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence