iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-24	86.7	708	778

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
            p ++ CpI +e+M+dP ++++G ty+r++I++w+++ +  +Pvt+++l+++dl+Pn+tlr+ i +w++++
   Q: 708  APTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLRSAIREWRSRS 778
           58899**************************************************************9987 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MVVMTNKFFE LIGGAPSYSS VSVAVKGSVG DAVGGTASRR ALRWTIENFL PKIDRLVLVH 60
VMPTVTTIPS PSGSKIPIEE LDESVVSMYK RDLRKEFEQV FVPFKRICKS NKVETLLLEH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTATCCA AGTCAACTAA AAACGCGGGT CTTCTTCTCC AAAACCCATT TCCTCACAAA 60
ATCCATCTGA GAAAAAGAGC AACAAGTTTC ATTTTCATGG TGGTGATGAC GAACAAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0418--Kinase
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR017441--Protein_kinase_ATP_BS
IPR014729--Rossmann-like_a/b/a_fold
IPR008271--Ser/Thr_kinase_AS
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00107--PROTEIN_KINASE_ATP
PS50011--PROTEIN_KINASE_DOM
PS00108--PROTEIN_KINASE_ST
PS51698--U_BOX

Pfam

PF00069--Pkinase
PF04564--U-box

SMART

SM00220--S_TKc
SM00504--Ubox

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT5G57035

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001068	Aegilops tauschii	52.89	2.00e-153	535.00
IUUC-Atr-002967	Amborella trichopoda	57.40	8.00e-160	556.00
IUUC-Apl-003389	Anas platyrhynchos	28.57	9.00e-18	85.50
IUUC-Aly-005867	Arabidopsis lyrata	94.44	0.00e+00	1453.00
IUUC-Bdi-014449	Brachypodium distachyon	42.63	2.00e-175	608.00
IUUC-Bol-015477	Brassica oleracea	86.09	0.00e+00	1323.00
IUUC-Bra-017546	Brassica rapa	87.20	0.00e+00	1331.00
IUUC-Gmo-038497	Gadus morhua	32.56	2.00e-21	96.70
IUUC-Gma-043059	Glycine max	53.16	0.00e+00	754.00
IUUC-Hvu-047818	Hordeum vulgare	44.08	2.00e-171	595.00
IUUC-Lch-049935	Latimeria chalumnae	29.81	6.00e-19	89.40
IUUC-Lpe-051534	Leersia perrieri	47.36	0.00e+00	644.00
IUUC-Mtr-057869	Medicago truncatula	54.01	0.00e+00	811.00
IUUC-Mac-064532	Musa acuminata	48.50	0.00e+00	671.00
IUUC-Oan-073526	Ornithorhynchus anatinus	28.57	2.00e-17	84.70
IUUC-Oba-075998	Oryza barthii	47.99	0.00e+00	651.00
IUUC-Obr-076585	Oryza brachyantha	46.78	5.00e-175	607.00
IUUC-Ogl-077452	Oryza glaberrima	48.18	0.00e+00	647.00
IUUC-Ogu-078147	Oryza glumaepatula	47.87	0.00e+00	662.00
IUUC-Oin-079983	Oryza indica	47.99	0.00e+00	649.00
IUUC-Olo-081004	Oryza longistaminata	47.80	2.00e-172	598.00
IUUC-Ome-081828	Oryza meridionalis	47.87	0.00e+00	662.00
IUUC-Oni-082859	Oryza nivara	47.87	0.00e+00	661.00
IUUC-Opu-083690	Oryza punctata	47.12	0.00e+00	649.00
IUUC-Oru-084532	Oryza rufipogon	47.87	0.00e+00	660.00
IUUC-Osa-085517	Oryza sativa	47.87	0.00e+00	660.00
IUUC-Ola-087339	Oryzias latipes	32.16	7.00e-23	102.00
IUUC-Pfo-096513	Poecilia formosa	31.08	2.00e-24	107.00
IUUC-Pop-099946	Populus trichocarpa	64.76	0.00e+00	673.00
IUUC-Ppe-101625	Prunus persica	57.95	0.00e+00	882.00
IUUC-Sit-110182	Setaria italica	45.71	0.00e+00	636.00
IUUC-Sly-111743	Solanum lycopersicum	52.82	0.00e+00	764.00
IUUC-Stu-112056	Solanum tuberosum	52.69	0.00e+00	754.00
IUUC-Sbi-114267	Sorghum bicolor	46.47	7.00e-174	603.00
IUUC-Tca-121461	Theobroma cacao	59.95	0.00e+00	896.00
IUUC-Tae-125706	Triticum aestivum	44.09	1.00e-178	619.00
IUUC-Tur-126322	Triticum urartu	45.47	1.00e-164	572.00
IUUC-Vvi-131372	Vitis vinifera	56.11	0.00e+00	835.00
IUUC-Xtr-131880	Xenopus tropicalis	30.31	6.00e-23	102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence