iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099183

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_423381; POPTR_0012s07790g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s07790	POPTR_0012s07790.1	POPTR_0012s07790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.00e-17	64.1	54	125

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p+eflCpI + lM+dPvv++sG+t++r s++ + + g +  ++ +  l + +  +Pnl+++++i +wc++++
   Q: 54   PPKEFLCPIYGSLMSDPVVVSSGQTFERLSVQVCRDLGFT-PTLEDNILPDFTTvIPNLAIKSTILHWCDTSG 125
           599************************************9.77777778666555**************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPTTAASFLN PKHQESKTPS ISPPPPQAMG GNGKRRWNIS FYSRSKTTQT QQLPPKEFLC 60
PIYGSLMSDP VVVSSGQTFE RLSVQVCRDL GFTPTLEDNI LPDFTTVIPN LAIKSTILHW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAGAGCCTT AACAGCAAAC TCATTTGCAA AAGCAATACT TAGAACATCT TTGACAGCTA 60
ACCGGACCAG TTCATTCATT AAAAAAAAAA AAAAAAAAGT TGGCAGTAGG TAATGGCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0012s07790g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014649	Brachypodium distachyon	35.71	7.00e-68	251.00
IUUC-Ete-032470	Echinops telfairi	30.23	2.00e-10	61.20
IUUC-Lpe-050893	Leersia perrieri	36.21	8.00e-55	207.00
IUUC-Oba-075532	Oryza barthii	49.76	2.00e-40	160.00
IUUC-Olo-080764	Oryza longistaminata	43.50	2.00e-35	142.00
IUUC-Smo-109005	Selaginella moellendorffii	40.80	2.00e-42	166.00
IUUC-Sit-109782	Setaria italica	36.50	4.00e-56	211.00
IUUC-Sbi-114055	Sorghum bicolor	45.18	3.00e-37	149.00
IUUC-Tae-123306	Triticum aestivum	36.82	1.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence