iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049719

Ensembl Protein ID

ENSLACP00000020796.1

UniProt Accession

H3BFX5; H3BFX5_LATCH

Genbank Protein ID

ENSLACP00000020796

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01022131

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000018268.1	ENSLACT00000020936.1	ENSLACP00000020796.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.90e-18	65.6	182	220
ULD/UDP/UBQ/UBQ_PIM	8.60e-26	89.9	24	98

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +e ++ ++++MG++re ++ aLra++nn+++AveyLl+g
   Q: 182  YENLVMEIMSMGYEREPVIAALRASYNNPDRAVEYLLTG 220
           678999*******************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvk 72
           m++tvktl++++f++e+++++tv++lK ki++e+g   +p++ qkLIyaGkiL+Dd +L++++i+++++v+++v 
   Q: 24   MWITVKTLQQQTFRVEMEPEETVKALKLKIESEKGsdaFPATAQKLIYAGKILNDDVSLQDYKIDEKNFVVVMVM 98
           99*********************************99999********************************985 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

VAPAVTSPLQ AEFSGSEQRE AGGMWITVKT LQQQTFRVEM EPEETVKALK LKIESEKGSD 60
AFPATAQKLI YAGKILNDDV SLQDYKIDEK NFVVVMVMKV GFSPAASAPA LAAPAPALAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGTATAGA GGGGAGCGGG ATTCTCTCCA GGATATTAAC AGCCTTTTTT TTGGGGGGGG 60
GGACTAGAAT TTGGGGATGT TGAAGGCTTC TCCCCGGAAC TATGACAGCC TGGCGGCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006159	Arabidopsis lyrata	36.18	2.00e-53	202.00
IUUC-Ath-007157	Arabidopsis thaliana	35.57	4.00e-53	201.00
IUUC-Acl-008212	Aspergillus clavatus	54.17	5.00e-22	98.60
IUUC-Afl-008605	Aspergillus flavus	38.78	2.00e-31	130.00
IUUC-Aor-010032	Aspergillus oryzae	39.34	1.00e-31	130.00
IUUC-Ate-010458	Aspergillus terreus	40.91	2.00e-35	142.00
IUUC-Ame-011107	Astyanax mexicanus	73.68	2.00e-62	233.00
IUUC-Bgr-012056	Blumeria graminis	35.37	3.00e-37	149.00
IUUC-Bci-013933	Botrytis cinerea	37.08	1.00e-40	160.00
IUUC-Bdi-014718	Brachypodium distachyon	34.54	1.00e-43	170.00
IUUC-Bol-016300	Brassica oleracea	36.27	7.00e-49	187.00
IUUC-Csv-025823	Ciona savignyi	37.86	5.00e-38	150.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	32.83	1.00e-21	97.40
IUUC-Cme-027260	Cyanidioschyzon merolae	26.39	3.00e-23	102.00
IUUC-Dre-027581	Danio rerio	75.93	3.00e-71	262.00
IUUC-Dme-032027	Drosophila melanogaster	38.44	1.00e-63	236.00
IUUC-Fox-037960	Fusarium oxysporum	39.02	2.00e-22	100.00
IUUC-Fso-038107	Fusarium solani	40.78	4.00e-25	108.00
IUUC-Gmo-039080	Gadus morhua	64.53	5.00e-61	227.00
IUUC-Ggr-040116	Gaeumannomyces graminis	50.81	2.00e-19	90.10
IUUC-Gac-042239	Gasterosteus aculeatus	54.26	4.00e-86	311.00
IUUC-Mor-057287	Magnaporthe oryzae	40.59	1.00e-24	107.00
IUUC-Mpo-057609	Magnaporthe poae	49.58	5.00e-18	84.70
IUUC-Mla-058961	Melampsora laricipopulina	43.61	4.00e-26	112.00
IUUC-Ont-072626	Oreochromis niloticus	70.90	4.00e-64	238.00
IUUC-Obr-076909	Oryza brachyantha	34.78	8.00e-49	187.00
IUUC-Ogl-077021	Oryza glaberrima	40.00	5.00e-38	151.00
IUUC-Ppa-095964	Physcomitrella patens	37.25	5.00e-35	141.00
IUUC-Pgr-103641	Puccinia graminis	36.98	2.00e-29	123.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	49.49	3.00e-19	89.40
IUUC-Smo-109129	Selaginella moellendorffii	38.78	3.00e-29	122.00
IUUC-Sit-110235	Setaria italica	37.01	6.00e-36	144.00
IUUC-Tre-121911	Trichoderma reesei	39.66	2.00e-30	125.00
IUUC-Tme-127092	Tuber melanosporum	56.45	8.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence