iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058194

Ensembl Protein ID

KEH41141

UniProt Accession

A0A072VHP2; A0A072VHP2_MEDTR

Genbank Protein ID

KEH41141.1

Protein Name

DNA repair helicase rad5,16, putative

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g044120

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g044120	KEH41141	KEH41141

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-08	34.8	917	957

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiC+e+++d p+++pC H+f+++Cl ++w      s++   CP+Cr
   Q: 917  CAICMESPDD-PVFTPCAHQFCRECLfNCW----GTSMGGK-CPICR 957
           **********.888***********99***....5555555.****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MENDNVVFRN GNPVLVAQPL TVVRARTSTG GGARVLATPP NQNPNSDESD ACKASIIKVK 60
DEPREFEDEA KSVTVAFQPP AAETVVECKT ESDERRSMLA FDDFLKATNT KVASVDESLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTCTTTCA CCATATATAA ACCCCCCCTT TCACTCTCTT CACTTTCTCT TCCTCAAAAG 60
TTTTCTATTT TTTTTTTCTT TTTCATTAAT TTCTTCCGCA AAATGGAAAA CGACAATGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0004386--F:helicase activity
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g044120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	54.21	0.00e+00	1021.00
IUUC-Atr-003058	Amborella trichopoda	56.49	0.00e+00	1032.00
IUUC-Aly-005600	Arabidopsis lyrata	60.91	0.00e+00	1143.00
IUUC-Ath-007079	Arabidopsis thaliana	60.67	0.00e+00	1126.00
IUUC-Ago-007997	Ashbya gossypii	29.72	2.00e-99	356.00
IUUC-Bgr-012147	Blumeria graminis	35.19	2.00e-126	446.00
IUUC-Bdi-014496	Brachypodium distachyon	53.69	0.00e+00	1003.00
IUUC-Bol-015995	Brassica oleracea	60.74	0.00e+00	1145.00
IUUC-Bra-017004	Brassica rapa	58.94	0.00e+00	1085.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	36.74	1.00e-126	447.00
IUUC-Dme-031815	Drosophila melanogaster	29.35	2.00e-67	250.00
IUUC-Gma-042857	Glycine max	66.00	0.00e+00	1493.00
IUUC-Hvu-047747	Hordeum vulgare	54.48	0.00e+00	1027.00
IUUC-Lpe-051123	Leersia perrieri	56.20	0.00e+00	1051.00
IUUC-Mac-064548	Musa acuminata	50.61	0.00e+00	949.00
IUUC-Ont-071782	Oreochromis niloticus	36.95	1.00e-105	377.00
IUUC-Oba-075316	Oryza barthii	55.04	0.00e+00	1028.00
IUUC-Obr-076834	Oryza brachyantha	56.44	0.00e+00	1057.00
IUUC-Ogl-077508	Oryza glaberrima	56.67	0.00e+00	1046.00
IUUC-Ogu-078083	Oryza glumaepatula	55.14	0.00e+00	1050.00
IUUC-Oin-079893	Oryza indica	56.88	0.00e+00	1066.00
IUUC-Olo-080615	Oryza longistaminata	56.99	0.00e+00	1071.00
IUUC-Oni-082773	Oryza nivara	55.35	0.00e+00	1051.00
IUUC-Opu-083675	Oryza punctata	56.46	0.00e+00	1071.00
IUUC-Oru-084543	Oryza rufipogon	55.35	0.00e+00	1050.00
IUUC-Pop-099537	Populus trichocarpa	61.19	0.00e+00	1166.00
IUUC-Ppe-102107	Prunus persica	63.19	0.00e+00	1223.00
IUUC-Pte-104242	Pyrenophora teres	34.46	2.00e-122	433.00
IUUC-Sce-106396	Saccharomyces cerevisiae	31.06	5.00e-104	372.00
IUUC-Sit-110795	Setaria italica	56.36	0.00e+00	1001.00
IUUC-Sly-111031	Solanum lycopersicum	60.96	0.00e+00	1172.00
IUUC-Stu-112600	Solanum tuberosum	61.00	0.00e+00	1174.00
IUUC-Sbi-114616	Sorghum bicolor	55.54	0.00e+00	1013.00
IUUC-Sre-115131	Sporisorium reilianum	33.02	6.00e-114	405.00
IUUC-Tru-117768	Takifugu rubripes	37.22	9.00e-102	364.00
IUUC-Tca-121146	Theobroma cacao	56.38	0.00e+00	1198.00
IUUC-Tae-125036	Triticum aestivum	54.63	0.00e+00	1024.00
IUUC-Tur-125999	Triticum urartu	51.79	0.00e+00	962.00
IUUC-Uma-129629	Ustilago maydis	33.69	3.00e-118	419.00
IUUC-Vvi-131508	Vitis vinifera	62.71	0.00e+00	1205.00
IUUC-Yli-134588	Yarrowia lipolytica	32.43	5.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence