iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132381

Ensembl Protein ID

ENSXETP00000039482.3

UniProt Accession

Q28DT0; Q28DT0_XENTR

Genbank Protein ID

CAJ83927.1

Protein Name

UBX domain containing 4

Genbank Nucleotide ID

AAMC01052182

Gene Name

ubxn2a; ubxd4; TGas072n12.1-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000018210.3	ENSXETT00000039482.3	ENSXETP00000039482.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	3.30e-13	50.2	167	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 4    eqatlqiRlpdGkrlvrkFpssttleqiyqfve.yllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsl 77
           + ++++++l+dGkr+v+kF+ s++++++++f+e   ++  + pF+L ++fP  +l +e+   t+qea+L +s  +
   Q: 167  PLTNIKVWLADGKRIVQKFNTSHRISDVRDFLErIPCKPGNAPFTLATSFPLHDLLDESL--TIQEAELQNSVLV 239
           5689*****************************8888999********************..*********9887 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MREADKLDNM KSQDRGFRSG GRGSERKRCD SFVNSLFEEA ENAGALIASP EDEDSNADVI 60
IKMWKNGFTI NDGYLRDYSG AENRQFMDSV RKGELPEELQ KTFDKEEIAV NVEDRKNEEY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAGTCCGG TCGGACTGGG GCTGTAGGAG ACGTACTGTG GCGATGGTGA GTGCCCTTGG 60
GGGCGGGGCT CAGTTTGTTG CGGTACCGGG AGATACAATC ACACGGATAA TAACACAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012989--SEP_domain
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000550	Aegilops tauschii	34.92	2.00e-29	122.00
IUUC-Aml-002393	Ailuropoda melanoleuca	54.98	9.00e-58	216.00
IUUC-Atr-002543	Amborella trichopoda	33.16	6.00e-25	108.00
IUUC-Apl-004089	Anas platyrhynchos	52.73	1.00e-65	242.00
IUUC-Aca-005094	Anolis carolinensis	51.75	1.00e-65	242.00
IUUC-Aly-006329	Arabidopsis lyrata	38.83	1.00e-25	109.00
IUUC-Ath-007369	Arabidopsis thaliana	36.70	4.00e-25	108.00
IUUC-Ago-007933	Ashbya gossypii	29.69	3.00e-09	56.20
IUUC-Acl-008176	Aspergillus clavatus	29.84	6.00e-19	88.20
IUUC-Afl-008553	Aspergillus flavus	31.25	1.00e-16	80.50
IUUC-Afu-008919	Aspergillus fumigatus	31.58	2.00e-19	89.70
IUUC-Ani-009398	Aspergillus nidulans	27.37	3.00e-21	95.90
IUUC-Ang-009594	Aspergillus niger	31.22	1.00e-19	90.50
IUUC-Aor-010016	Aspergillus oryzae	31.25	1.00e-16	80.50
IUUC-Ate-010455	Aspergillus terreus	27.67	3.00e-19	89.40
IUUC-Ame-011089	Astyanax mexicanus	35.51	2.00e-38	152.00
IUUC-Bgr-012256	Blumeria graminis	34.88	1.00e-20	94.40
IUUC-Bta-012790	Bos taurus	50.58	5.00e-58	217.00
IUUC-Bci-013750	Botrytis cinerea	27.07	2.00e-14	73.60
IUUC-Bdi-014746	Brachypodium distachyon	33.94	2.00e-28	119.00
IUUC-Bol-016173	Brassica oleracea	36.32	1.00e-26	113.00
IUUC-Bra-017734	Brassica rapa	37.93	8.00e-26	110.00
IUUC-Cel-018169	Caenorhabditis elegans	27.86	2.00e-20	92.80
IUUC-Cja-019967	Callithrix jacchus	49.22	2.00e-55	208.00
IUUC-Cfa-020180	Canis familiaris	51.56	2.00e-58	218.00
IUUC-Cpo-021719	Cavia porcellus	46.09	8.00e-52	196.00
IUUC-Csa-023840	Chlorocebus sabaeus	49.81	4.00e-58	217.00
IUUC-Cho-024683	Choloepus hoffmanni	52.68	8.00e-54	203.00
IUUC-Cin-025686	Ciona intestinalis	40.64	4.00e-38	151.00
IUUC-Csv-025945	Ciona savignyi	40.41	5.00e-37	148.00
IUUC-Cgl-026628	Colletotrichum gloeosporioides	25.56	5.00e-12	65.10
IUUC-Cne-026798	Cryptococcus neoformans	30.81	1.00e-24	107.00
IUUC-Cme-027347	Cyanidioschyzon merolae	31.91	5.00e-20	91.70
IUUC-Dre-028501	Danio rerio	42.15	4.00e-48	184.00
IUUC-Dno-029129	Dasypus novemcinctus	50.39	7.00e-64	236.00
IUUC-Dor-030203	Dipodomys ordii	41.43	5.00e-42	164.00
IUUC-Dse-031256	Dothistroma septosporum	28.26	2.00e-19	90.10
IUUC-Dme-031878	Drosophila melanogaster	33.67	2.00e-30	126.00
IUUC-Ete-033198	Echinops telfairi	51.78	1.00e-42	166.00
IUUC-Eca-033335	Equus caballus	51.95	2.00e-58	218.00
IUUC-Eeu-035097	Erinaceus europaeus	45.71	2.00e-06	46.20
IUUC-Fca-036141	Felis catus	51.17	4.00e-56	211.00
IUUC-Fal-037574	Ficedula albicollis	51.95	2.00e-59	222.00
IUUC-Fso-038190	Fusarium solani	24.86	4.00e-13	68.90
IUUC-Gmo-039656	Gadus morhua	41.79	1.00e-35	142.00
IUUC-Ggr-039971	Gaeumannomyces graminis	25.84	3.00e-11	62.80
IUUC-Gga-040681	Gallus gallus	53.12	3.00e-65	241.00
IUUC-Gac-042408	Gasterosteus aculeatus	42.79	3.00e-42	164.00
IUUC-Gma-044294	Glycine max	36.32	2.00e-26	113.00
IUUC-Ggo-045649	Gorilla gorilla	49.21	3.00e-55	207.00
IUUC-Hsa-045755	Homo sapiens	48.81	6.00e-55	206.00
IUUC-Hvu-047203	Hordeum vulgare	32.31	3.00e-20	92.00
IUUC-Itr-047949	Ictidomys tridecemlineatus	39.07	6.00e-40	157.00
IUUC-Kpa-049322	Komagataella pastoris	24.58	2.00e-11	63.20
IUUC-Lch-050482	Latimeria chalumnae	50.46	1.00e-56	212.00
IUUC-Lpe-051491	Leersia perrieri	33.88	6.00e-23	100.00
IUUC-Loc-052184	Lepisosteus oculatus	47.93	3.00e-51	194.00
IUUC-Lma-053319	Leptosphaeria maculans	28.06	6.00e-17	81.60
IUUC-Laf-053715	Loxodonta africana	52.14	6.00e-59	220.00
IUUC-Mcc-055472	Macaca mulatta	40.95	2.00e-41	162.00
IUUC-Meu-056093	Macropus eugenii	35.62	7.00e-27	114.00
IUUC-Mor-057220	Magnaporthe oryzae	27.87	2.00e-12	66.60
IUUC-Mpo-057595	Magnaporthe poae	26.23	7.00e-16	78.20
IUUC-Mtr-058376	Medicago truncatula	32.06	7.00e-23	101.00
IUUC-Mla-059077	Melampsora laricipopulina	32.12	3.00e-22	99.80
IUUC-Mga-060206	Meleagris gallopavo	53.52	7.00e-66	243.00
IUUC-Mvi-060292	Microbotryum violaceum	28.57	7.00e-20	91.70
IUUC-Mmr-061401	Microcebus murinus	50.00	2.00e-57	214.00
IUUC-Mdo-061891	Monodelphis domestica	43.78	3.00e-55	208.00
IUUC-Mmu-063822	Mus musculus	48.45	6.00e-55	207.00
IUUC-Mac-065403	Musa acuminata	37.77	1.00e-26	114.00
IUUC-Mpu-066583	Mustela putorius furo	54.19	3.00e-56	211.00
IUUC-Mlu-067179	Myotis lucifugus	51.55	3.00e-54	204.00
IUUC-Nfi-068609	Neosartorya fischeri	28.95	4.00e-19	88.60
IUUC-Ncr-068786	Neurospora crassa	28.26	6.00e-16	78.60
IUUC-Nle-069125	Nomascus leucogenys	49.21	7.00e-55	206.00
IUUC-Opr-070527	Ochotona princeps	41.86	3.00e-43	168.00
IUUC-Ont-072648	Oreochromis niloticus	42.29	4.00e-40	157.00
IUUC-Oan-072825	Ornithorhynchus anatinus	49.61	5.00e-52	197.00
IUUC-Ocu-074597	Oryctolagus cuniculus	54.91	2.00e-57	215.00
IUUC-Oba-075011	Oryza barthii	31.82	1.00e-26	113.00
IUUC-Obr-076164	Oryza brachyantha	30.94	2.00e-24	105.00
IUUC-Ogl-077805	Oryza glaberrima	31.82	1.00e-26	113.00
IUUC-Ogu-078942	Oryza glumaepatula	31.82	7.00e-27	114.00
IUUC-Oin-079497	Oryza indica	31.82	1.00e-26	113.00
IUUC-Olo-080254	Oryza longistaminata	34.92	2.00e-26	113.00
IUUC-Ome-081766	Oryza meridionalis	33.33	5.00e-19	90.10
IUUC-Oni-082258	Oryza nivara	31.82	1.00e-26	113.00
IUUC-Opu-083331	Oryza punctata	30.43	2.00e-21	97.10
IUUC-Oru-084748	Oryza rufipogon	31.82	7.00e-27	114.00
IUUC-Osa-085359	Oryza sativa	31.82	1.00e-26	113.00
IUUC-Ola-086761	Oryzias latipes	35.74	2.00e-37	149.00
IUUC-Olu-087598	Ostreococcus lucimarinus	30.98	5.00e-22	98.20
IUUC-Oga-088217	Otolemur garnettii	47.86	2.00e-52	198.00
IUUC-Oar-090372	Ovis aries	49.42	1.00e-55	209.00
IUUC-Ptr-091011	Pan troglodytes	48.83	1.00e-52	199.00
IUUC-Pan-092177	Papio anubis	49.81	2.00e-58	218.00
IUUC-Psi-093793	Pelodiscus sinensis	52.53	6.00e-66	243.00
IUUC-Pma-094475	Petromyzon marinus	35.62	6.00e-36	144.00
IUUC-Pno-094769	Phaeosphaeria nodorum	29.08	6.00e-19	88.60
IUUC-Ppa-095833	Physcomitrella patens	34.74	1.00e-25	110.00
IUUC-Pfo-096059	Poecilia formosa	42.79	4.00e-41	160.00
IUUC-Pab-098103	Pongo abelii	48.03	9.00e-51	193.00
IUUC-Pop-099170	Populus trichocarpa	36.51	1.00e-25	109.00
IUUC-Pca-101031	Procavia capensis	44.49	2.00e-41	162.00
IUUC-Ppe-101417	Prunus persica	32.81	3.00e-21	95.90
IUUC-Pva-102671	Pteropus vampyrus	42.73	2.00e-34	138.00
IUUC-Pgr-103447	Puccinia graminis	28.50	2.00e-22	100.00
IUUC-Ptt-103729	Puccinia triticina	29.53	5.00e-23	102.00
IUUC-Pte-104083	Pyrenophora teres	30.46	1.00e-21	97.10
IUUC-Pyt-104504	Pyrenophora triticirepentis	29.95	3.00e-17	82.40
IUUC-Rno-105700	Rattus norvegicus	48.64	3.00e-56	211.00
IUUC-Sce-106457	Saccharomyces cerevisiae	30.69	7.00e-17	81.60
IUUC-Sha-106530	Sarcophilus harrisii	30.98	4.00e-14	71.20
IUUC-Sja-107717	Schizosaccharomyces japonicus	29.86	1.00e-19	90.50
IUUC-Spo-108358	Schizosaccharomyces pombe	30.50	4.00e-19	89.00
IUUC-Smo-109535	Selaginella moellendorffii	32.85	6.00e-23	100.00
IUUC-Sit-110328	Setaria italica	32.98	6.00e-24	105.00
IUUC-Sly-111135	Solanum lycopersicum	36.63	2.00e-25	109.00
IUUC-Stu-112733	Solanum tuberosum	36.63	3.00e-25	108.00
IUUC-Sar-113329	Sorex araneus	50.43	7.00e-18	84.00
IUUC-Sbi-114761	Sorghum bicolor	34.74	2.00e-25	108.00
IUUC-Sre-115176	Sporisorium reilianum	30.41	5.00e-21	95.50
IUUC-Ssc-115898	Sus scrofa	54.02	2.00e-63	235.00
IUUC-Tgu-116984	Taeniopygia guttata	51.56	8.00e-64	236.00
IUUC-Tru-118339	Takifugu rubripes	42.64	4.00e-46	177.00
IUUC-Tsy-119015	Tarsius syrichta	40.10	1.00e-39	156.00
IUUC-Tni-119705	Tetraodon nigroviridis	35.83	3.00e-39	155.00
IUUC-Tca-121311	Theobroma cacao	34.74	2.00e-20	92.40
IUUC-Tre-121941	Trichoderma reesei	26.29	8.00e-16	77.80
IUUC-Tvi-122602	Trichoderma virens	25.42	2.00e-14	73.20
IUUC-Tae-123686	Triticum aestivum	35.98	2.00e-30	126.00
IUUC-Tur-126267	Triticum urartu	33.17	2.00e-26	112.00
IUUC-Tme-127193	Tuber melanosporum	29.02	1.00e-16	80.10
IUUC-Tbe-127537	Tupaia belangeri	44.64	1.00e-35	142.00
IUUC-Ttr-128822	Tursiops truncatus	38.13	6.00e-41	160.00
IUUC-Uma-129600	Ustilago maydis	30.54	9.00e-21	94.40
IUUC-Vda-129743	Verticillium dahliae	28.89	7.00e-15	74.70
IUUC-Vpa-130266	Vicugna pacos	55.10	2.00e-46	178.00
IUUC-Vvi-131220	Vitis vinifera	34.92	8.00e-25	107.00
IUUC-Xma-133694	Xiphophorus maculatus	42.79	6.00e-41	160.00
IUUC-Yli-134604	Yarrowia lipolytica	28.27	8.00e-17	81.30
IUUC-Zma-135541	Zea mays	34.22	4.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence