iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099189

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_758350; POPTR_0003s21700g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s21700	POPTR_0003s21700.1	POPTR_0003s21700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.80e-23	81.6	687	757

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawcee 71
           +p++f+Cp++ +l++dPv+l++G+t++r++I+kw+++g++tcP+t+++l+  ++   n  l+r+i++w  e
   Q: 687  IPQDFVCPLTRQLFEDPVTLETGQTFEREAIRKWFNQGNRTCPLTGKTLECPTIpLTNFILKRMIDSWKLE 757
           8************************************************877777*************765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATSLEELLA KEGFRGGRSG TRARPSFKAE AASMPRYPFG DQGKRDSPSG PSMRRIKTER 60
TRSDVTRYTL RGESPGSNSS LSRRPRDDLV KREKLDSRLK AEHRGRGSKD VKEDKTLKVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAATCCAG AAACTCTTCA TGGCTTTTGC TTGTCAAGCA TCTTCTTTAT CTCCCCTTTT 60
TTTCTCCCCC CAAGATTCCC CAATATTCTT GCAATATTCC ACTCATTTCT CAGTTATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0003s21700g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	38.33	0.00e+00	688.00
IUUC-Bci-013738	Botrytis cinerea	34.31	4.00e-06	45.40
IUUC-Bdi-014999	Brachypodium distachyon	33.40	8.00e-63	234.00
IUUC-Gma-044073	Glycine max	45.43	0.00e+00	823.00
IUUC-Hvu-047722	Hordeum vulgare	38.10	5.00e-68	252.00
IUUC-Lpe-051567	Leersia perrieri	41.00	5.00e-75	275.00
IUUC-Mtr-058670	Medicago truncatula	47.05	0.00e+00	746.00
IUUC-Mac-065130	Musa acuminata	38.30	6.00e-147	514.00
IUUC-Oba-075449	Oryza barthii	39.70	2.00e-75	277.00
IUUC-Obr-076588	Oryza brachyantha	39.80	2.00e-74	273.00
IUUC-Ogu-078984	Oryza glumaepatula	39.07	4.00e-78	285.00
IUUC-Ome-081747	Oryza meridionalis	36.51	4.00e-76	279.00
IUUC-Oni-082227	Oryza nivara	39.36	3.00e-73	270.00
IUUC-Opu-083803	Oryza punctata	39.42	2.00e-81	296.00
IUUC-Oru-084717	Oryza rufipogon	39.57	6.00e-76	278.00
IUUC-Osa-085390	Oryza sativa	44.88	8.00e-47	181.00
IUUC-Sit-110010	Setaria italica	43.88	3.00e-45	176.00
IUUC-Stu-112239	Solanum tuberosum	48.84	2.00e-119	422.00
IUUC-Sbi-113947	Sorghum bicolor	35.26	8.00e-75	274.00
IUUC-Tca-121435	Theobroma cacao	53.31	0.00e+00	1051.00
IUUC-Tae-125606	Triticum aestivum	38.13	3.00e-75	276.00
IUUC-Tur-126526	Triticum urartu	37.69	4.00e-63	235.00
IUUC-Vvi-130964	Vitis vinifera	50.81	0.00e+00	965.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence