iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090604

UUCD1 version

UUC-PaT-00754

Ensembl Protein ID

ENSPTRP00000037896.2

UniProt Accession

H2QYT6; H2QYT6_PANTR

Genbank Protein ID

JAA03639.1; JAA03640.1; JAA17790.1; JAA17791.1; JAA25878.1; JAA25879.1; JAA37847.1; JAA37848.1

Protein Name

Ring finger protein, LIM domain interacting

Genbank Nucleotide ID

AACZ03140395; GABC01007698; GABF01004355; GABF01004354; GABD01007222; GABD01007221; GABE01006892; GABE01006891

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000022037.2	ENSPTRT00000041018.2	ENSPTRP00000037896.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-07	30.7	566	607

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 566  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 607
           9*******5554499****************......**********8 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MENSDSNDKG SGDQSAAQRR SQMDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGTPGEST 60
EEELLRRLQQ IKEGPPPQNS DENRGGDSSD DVSNGDSIID WLNSVRQTGN TTRSGQRGNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGCTTGGT AACAATGGGG AAGATAATGG CTGCCTGAGC AACGTCTCCG AGCAGGCGCT 60
GGGCTAGAGG CGGGTCTCAA CCAGCTACTC ATTGGAGGCG GGCTTGAGAG CGGCGGCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060816--P:random inactivation of X chromosome
GO:1900095--P:regulation of dosage compensation by inactivation of X chromosome

KEGG

ptr:739040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000316	Aegilops tauschii	42.37	5.00e-10	57.00
IUUC-Aml-001407	Ailuropoda melanoleuca	96.38	0.00e+00	700.00
IUUC-Atr-002539	Amborella trichopoda	47.54	1.00e-14	73.90
IUUC-Apl-003969	Anas platyrhynchos	76.67	1.00e-164	573.00
IUUC-Aca-005377	Anolis carolinensis	72.30	3.00e-82	299.00
IUUC-Aly-005870	Arabidopsis lyrata	42.70	3.00e-16	79.30
IUUC-Ath-007543	Arabidopsis thaliana	49.21	4.00e-15	74.30
IUUC-Bta-013113	Bos taurus	95.73	0.00e+00	726.00
IUUC-Bdi-014392	Brachypodium distachyon	47.06	2.00e-14	72.00
IUUC-Bol-015085	Brassica oleracea	41.94	6.00e-16	78.20
IUUC-Bra-018013	Brassica rapa	42.86	2.00e-16	79.70
IUUC-Cja-018860	Callithrix jacchus	98.06	0.00e+00	933.00
IUUC-Cfa-020358	Canis familiaris	96.15	0.00e+00	698.00
IUUC-Cpo-021533	Cavia porcellus	95.45	0.00e+00	649.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	1.00e-13	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	95.19	0.00e+00	895.00
IUUC-Cho-024536	Choloepus hoffmanni	87.18	1.00e-168	585.00
IUUC-Cne-026941	Cryptococcus neoformans	34.94	1.00e-10	61.60
IUUC-Dre-027894	Danio rerio	55.63	3.00e-108	385.00
IUUC-Dno-029606	Dasypus novemcinctus	95.89	0.00e+00	759.00
IUUC-Dor-031042	Dipodomys ordii	88.21	0.00e+00	651.00
IUUC-Ete-033099	Echinops telfairi	90.27	0.00e+00	650.00
IUUC-Eca-033976	Equus caballus	96.36	0.00e+00	762.00
IUUC-Eeu-034964	Erinaceus europaeus	86.12	2.00e-155	542.00
IUUC-Fca-035662	Felis catus	96.61	0.00e+00	702.00
IUUC-Fal-036996	Ficedula albicollis	78.12	5.00e-157	547.00
IUUC-Gmo-039207	Gadus morhua	76.86	1.00e-47	184.00
IUUC-Gma-043292	Glycine max	47.37	3.00e-16	79.30
IUUC-Ggo-044754	Gorilla gorilla	97.76	0.00e+00	973.00
IUUC-Hsa-045776	Homo sapiens	97.76	0.00e+00	973.00
IUUC-Hvu-047745	Hordeum vulgare	52.94	1.00e-14	74.30
IUUC-Itr-048044	Ictidomys tridecemlineatus	95.24	0.00e+00	717.00
IUUC-Lch-050178	Latimeria chalumnae	67.40	2.00e-131	462.00
IUUC-Lpe-051680	Leersia perrieri	42.86	1.00e-14	73.90
IUUC-Loc-052124	Lepisosteus oculatus	58.85	1.00e-105	377.00
IUUC-Laf-054328	Loxodonta africana	95.01	0.00e+00	713.00
IUUC-Mcc-054739	Macaca mulatta	97.28	0.00e+00	970.00
IUUC-Meu-056359	Macropus eugenii	76.39	1.00e-147	516.00
IUUC-Mtr-058167	Medicago truncatula	47.37	2.00e-15	76.60
IUUC-Mga-059838	Meleagris gallopavo	78.78	8.00e-168	583.00
IUUC-Mmr-060608	Microcebus murinus	94.58	0.00e+00	691.00
IUUC-Mdo-061961	Monodelphis domestica	78.11	6.00e-152	530.00
IUUC-Mmu-064278	Mus musculus	87.65	3.00e-171	595.00
IUUC-Mac-065396	Musa acuminata	43.42	1.00e-14	73.20
IUUC-Mpu-066258	Mustela putorius furo	95.07	4.00e-164	571.00
IUUC-Mlu-066930	Myotis lucifugus	94.78	0.00e+00	752.00
IUUC-Nle-069311	Nomascus leucogenys	97.43	0.00e+00	969.00
IUUC-Opr-071124	Ochotona princeps	92.75	7.00e-89	321.00
IUUC-Oan-073036	Ornithorhynchus anatinus	74.94	1.00e-152	533.00
IUUC-Ocu-073795	Oryctolagus cuniculus	95.01	0.00e+00	674.00
IUUC-Oba-075403	Oryza barthii	42.86	2.00e-14	73.90
IUUC-Obr-076503	Oryza brachyantha	42.86	2.00e-14	73.20
IUUC-Ogl-077574	Oryza glaberrima	42.86	2.00e-14	73.90
IUUC-Ogu-077986	Oryza glumaepatula	42.86	2.00e-14	73.90
IUUC-Oin-079091	Oryza indica	42.86	2.00e-14	73.90
IUUC-Olo-080996	Oryza longistaminata	37.63	6.00e-14	71.60
IUUC-Ome-081627	Oryza meridionalis	42.86	2.00e-14	73.90
IUUC-Oni-082260	Oryza nivara	42.86	2.00e-14	73.90
IUUC-Opu-083578	Oryza punctata	42.86	1.00e-14	74.30
IUUC-Oru-084794	Oryza rufipogon	42.86	2.00e-14	73.90
IUUC-Osa-085348	Oryza sativa	42.86	2.00e-14	73.90
IUUC-Olu-087781	Ostreococcus lucimarinus	40.30	8.00e-13	66.20
IUUC-Oga-088022	Otolemur garnettii	95.82	0.00e+00	739.00
IUUC-Oar-089348	Ovis aries	95.72	0.00e+00	728.00
IUUC-Pan-092322	Papio anubis	97.28	0.00e+00	970.00
IUUC-Psi-093936	Pelodiscus sinensis	72.58	1.00e-149	523.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	2.00e-16	80.90
IUUC-Pab-098671	Pongo abelii	97.44	0.00e+00	970.00
IUUC-Pop-099808	Populus trichocarpa	45.95	7.00e-16	77.80
IUUC-Pca-100263	Procavia capensis	94.56	0.00e+00	699.00
IUUC-Ppe-101202	Prunus persica	43.59	2.00e-15	77.40
IUUC-Pva-102709	Pteropus vampyrus	92.97	0.00e+00	661.00
IUUC-Ptt-103976	Puccinia triticina	43.75	1.00e-10	59.30
IUUC-Rno-105759	Rattus norvegicus	89.27	2.00e-177	615.00
IUUC-Sha-106792	Sarcophilus harrisii	77.12	2.00e-138	486.00
IUUC-Smo-109572	Selaginella moellendorffii	44.09	1.00e-15	75.90
IUUC-Sit-109852	Setaria italica	42.86	2.00e-14	73.90
IUUC-Sly-111747	Solanum lycopersicum	62.86	2.00e-12	67.40
IUUC-Stu-112609	Solanum tuberosum	47.22	2.00e-16	79.70
IUUC-Sar-113271	Sorex araneus	85.75	3.00e-178	618.00
IUUC-Sbi-114435	Sorghum bicolor	44.16	2.00e-14	73.60
IUUC-Ssc-115738	Sus scrofa	95.70	0.00e+00	733.00
IUUC-Tgu-117205	Taeniopygia guttata	76.63	5.00e-159	554.00
IUUC-Tru-118123	Takifugu rubripes	87.62	3.00e-55	209.00
IUUC-Tsy-119421	Tarsius syrichta	96.38	0.00e+00	763.00
IUUC-Tca-121367	Theobroma cacao	47.37	2.00e-16	79.70
IUUC-Tae-124344	Triticum aestivum	43.06	1.00e-12	66.20
IUUC-Tur-126084	Triticum urartu	42.86	2.00e-13	72.00
IUUC-Tbe-127543	Tupaia belangeri	95.93	0.00e+00	753.00
IUUC-Vpa-130058	Vicugna pacos	96.83	0.00e+00	707.00
IUUC-Vvi-131093	Vitis vinifera	47.37	1.00e-16	80.50
IUUC-Xtr-132663	Xenopus tropicalis	62.26	2.00e-108	386.00
IUUC-Yli-134448	Yarrowia lipolytica	34.12	4.00e-10	57.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence