iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116114

Ensembl Protein ID

ENSSSCP00000027734.1

UniProt Accession

I3LUD5; I3LUD5_PIG

Genbank Protein ID

ENSSSCP00000027734

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312617

Gene Name

UBXN1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000023110.1	ENSSSCT00000029345.1	ENSSSCP00000027734.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.90e-09	36.1	4	42
ULD/UDP/UFD/UBX	1.30e-20	74.0	210	291

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
             +le l+eMGF+r +a +aL+ + n  +eaA+++L+++
   Q: 4    LTALESLIEMGFPRGRAEKALALTgNQGIEAAMDWLMEH 42
           5689********************************987 PP

ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfve....yllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsllv 79
           +++q+++q+RlpdG  l+++F+++++l +++ +ve    ++l+  +dp +L+s+fPrr +++ ++++ lqe+gLvps++l+v
   Q: 210  EYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVElhrgEELGGGQDPVQLLSGFPRRAFSEADMERPLQELGLVPSAVLIV 291
           578*****************************************************************************98 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAELTALESL IEMGFPRGRA EKALALTGNQ GIEAAMDWLM EHEDDPDVDE PLATPLGHVL 60
GREPTPSEQS SPEGPGSAAG EGKPPLSEEE RQEQTKRMLE LLAQKQRERE EREEREALER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCACTTCC GCTTCCCCCG GGCTTTCTTC TCGTCAGTGT CCGCGGCCGG GCCGCTGCCG 60
GTGAGTAAGC GAGCCCCGGG CTGGGGCTTT GGAGGCGGGA TTGCGCGCCG GCGGGGGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50030--UBA
PS50033--UBX

Pfam

PF00627--UBA
PF00789--UBX

SMART

SM00165--UBA
SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0000502--C:proteasome complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:1904293--P:negative regulation of ERAD pathway
GO:0032435--P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:1903094--P:negative regulation of protein K48-linked deubiquitination
GO:0031397--P:negative regulation of protein ubiquitination
GO:2000157--P:negative regulation of ubiquitin-specific protease activity

KEGG

ssc:100621165

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001103	Aegilops tauschii	42.11	2.00e-09	56.60
IUUC-Aml-002325	Ailuropoda melanoleuca	92.52	7.00e-112	396.00
IUUC-Atr-002867	Amborella trichopoda	33.33	7.00e-10	58.50
IUUC-Aca-004329	Anolis carolinensis	70.83	2.00e-48	184.00
IUUC-Aly-005639	Arabidopsis lyrata	50.91	9.00e-12	64.30
IUUC-Ath-006887	Arabidopsis thaliana	50.91	1.00e-11	63.90
IUUC-Ago-007989	Ashbya gossypii	37.18	8.00e-07	47.40
IUUC-Ame-011399	Astyanax mexicanus	54.07	8.00e-64	236.00
IUUC-Bta-013151	Bos taurus	94.59	9.00e-120	422.00
IUUC-Bdi-014311	Brachypodium distachyon	54.55	1.00e-09	57.40
IUUC-Bol-016537	Brassica oleracea	50.91	1.00e-11	63.90
IUUC-Bra-017906	Brassica rapa	59.09	2.00e-11	63.90
IUUC-Cel-018300	Caenorhabditis elegans	35.07	2.00e-13	69.30
IUUC-Cja-019084	Callithrix jacchus	95.07	3.00e-101	361.00
IUUC-Cfa-020997	Canis familiaris	88.03	2.00e-89	321.00
IUUC-Cpo-021736	Cavia porcellus	77.78	3.00e-79	287.00
IUUC-Csa-024040	Chlorocebus sabaeus	95.62	1.00e-101	362.00
IUUC-Cho-024543	Choloepus hoffmanni	94.55	2.00e-62	231.00
IUUC-Cin-025719	Ciona intestinalis	39.32	2.00e-35	142.00
IUUC-Csv-025854	Ciona savignyi	38.33	6.00e-34	137.00
IUUC-Cme-027235	Cyanidioschyzon merolae	47.73	4.00e-08	52.80
IUUC-Dre-027745	Danio rerio	52.82	2.00e-61	228.00
IUUC-Dno-029598	Dasypus novemcinctus	91.58	5.00e-103	367.00
IUUC-Dor-030917	Dipodomys ordii	81.34	2.00e-89	322.00
IUUC-Dme-032055	Drosophila melanogaster	43.03	2.00e-23	102.00
IUUC-Ete-032960	Echinops telfairi	74.47	1.00e-71	262.00
IUUC-Eca-034294	Equus caballus	93.60	2.00e-106	378.00
IUUC-Eeu-034906	Erinaceus europaeus	90.18	2.00e-96	345.00
IUUC-Fca-035653	Felis catus	90.49	1.00e-95	342.00
IUUC-Gmo-038755	Gadus morhua	49.68	2.00e-55	208.00
IUUC-Gac-042481	Gasterosteus aculeatus	54.49	6.00e-59	220.00
IUUC-Ggo-044821	Gorilla gorilla	94.37	7.00e-95	339.00
IUUC-Hsa-046797	Homo sapiens	95.62	7.00e-106	376.00
IUUC-Itr-048850	Ictidomys tridecemlineatus	95.29	1.00e-115	408.00
IUUC-Lch-049508	Latimeria chalumnae	67.37	5.00e-33	134.00
IUUC-Laf-053932	Loxodonta africana	94.61	4.00e-124	437.00
IUUC-Mcc-055300	Macaca mulatta	95.96	1.00e-101	362.00
IUUC-Mtr-058774	Medicago truncatula	50.00	7.00e-10	57.80
IUUC-Mvi-060245	Microbotryum violaceum	42.17	2.00e-11	63.20
IUUC-Mmr-060979	Microcebus murinus	92.59	6.00e-107	379.00
IUUC-Mdo-062299	Monodelphis domestica	86.97	3.00e-94	337.00
IUUC-Mmu-063212	Mus musculus	92.59	6.00e-109	386.00
IUUC-Mac-065377	Musa acuminata	51.11	1.00e-11	60.80
IUUC-Mpu-066540	Mustela putorius furo	92.93	4.00e-114	403.00
IUUC-Mlu-067589	Myotis lucifugus	89.56	3.00e-104	370.00
IUUC-Nle-069045	Nomascus leucogenys	95.16	5.00e-76	276.00
IUUC-Opr-070772	Ochotona princeps	89.75	1.00e-88	318.00
IUUC-Ont-072006	Oreochromis niloticus	53.77	5.00e-58	217.00
IUUC-Oan-073244	Ornithorhynchus anatinus	70.59	1.00e-11	63.20
IUUC-Ocu-074333	Oryctolagus cuniculus	94.61	4.00e-105	373.00
IUUC-Oba-075451	Oryza barthii	49.06	4.00e-11	62.40
IUUC-Obr-076923	Oryza brachyantha	55.10	1.00e-11	64.30
IUUC-Ogl-077259	Oryza glaberrima	39.73	2.00e-10	60.10
IUUC-Ogu-078589	Oryza glumaepatula	49.06	4.00e-11	62.40
IUUC-Oin-079151	Oryza indica	49.06	4.00e-11	62.40
IUUC-Ome-081253	Oryza meridionalis	49.06	3.00e-11	62.40
IUUC-Oni-082110	Oryza nivara	39.73	6.00e-11	61.20
IUUC-Opu-083336	Oryza punctata	49.06	4.00e-11	62.40
IUUC-Oru-085235	Oryza rufipogon	49.06	4.00e-11	62.40
IUUC-Osa-085611	Oryza sativa	49.06	4.00e-11	62.40
IUUC-Ola-086781	Oryzias latipes	54.37	2.00e-56	212.00
IUUC-Oga-088429	Otolemur garnettii	94.61	1.00e-103	368.00
IUUC-Oar-089885	Ovis aries	94.26	9.00e-120	422.00
IUUC-Ptr-091315	Pan troglodytes	95.05	7.00e-97	346.00
IUUC-Pan-092885	Papio anubis	95.62	1.00e-101	362.00
IUUC-Psi-093299	Pelodiscus sinensis	72.73	8.00e-64	236.00
IUUC-Pma-094221	Petromyzon marinus	64.37	2.00e-28	117.00
IUUC-Ppa-095484	Physcomitrella patens	51.11	2.00e-10	60.10
IUUC-Pfo-096188	Poecilia formosa	54.25	6.00e-56	210.00
IUUC-Pab-097881	Pongo abelii	88.22	5.00e-100	357.00
IUUC-Pop-098863	Populus trichocarpa	52.94	6.00e-12	65.10
IUUC-Pca-100977	Procavia capensis	91.99	8.00e-100	356.00
IUUC-Ppe-101243	Prunus persica	47.06	3.00e-10	58.50
IUUC-Pva-102169	Pteropus vampyrus	95.42	4.00e-100	357.00
IUUC-Rno-105459	Rattus norvegicus	91.58	3.00e-108	384.00
IUUC-Sha-107526	Sarcophilus harrisii	88.55	2.00e-93	335.00
IUUC-Ssl-108389	Sclerotinia sclerotiorum	26.47	4.00e-06	45.80
IUUC-Sit-110434	Setaria italica	35.71	8.00e-10	57.40
IUUC-Sly-111766	Solanum lycopersicum	45.90	7.00e-11	61.20
IUUC-Stu-112122	Solanum tuberosum	45.90	7.00e-11	61.20
IUUC-Sar-112945	Sorex araneus	92.64	2.00e-63	234.00
IUUC-Sbi-114159	Sorghum bicolor	30.36	9.00e-11	60.80
IUUC-Tru-117839	Takifugu rubripes	53.57	2.00e-56	211.00
IUUC-Tsy-118813	Tarsius syrichta	91.87	2.00e-54	205.00
IUUC-Tni-120504	Tetraodon nigroviridis	55.85	4.00e-58	217.00
IUUC-Tbe-128034	Tupaia belangeri	94.01	1.00e-104	372.00
IUUC-Ttr-128468	Tursiops truncatus	89.19	9.00e-106	376.00
IUUC-Uma-129569	Ustilago maydis	34.62	2.00e-05	43.10
IUUC-Vpa-130179	Vicugna pacos	89.18	3.00e-71	260.00
IUUC-Xtr-132119	Xenopus tropicalis	62.08	5.00e-68	250.00
IUUC-Xma-134067	Xiphophorus maculatus	52.58	2.00e-55	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence