iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000003232.1	ENSONIT00000004059.1	ENSONIP00000004058.1
ENSONIG00000003232.1	ENSONIT00000004060.1	ENSONIP00000004059.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.40e-10	41.6	6	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C+ +++ ++ ++eC+ C++wfH  C+    e++ p+ + + Cp+C++
   Q: 6    VYC-ICRLPYDVTQFMIECDACKDWFHGSCVDVD-EDDAPDIDIYHCPNCEK 55
           69*.******************************.*******99******86 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MATVPVYCIC RLPYDVTQFM IECDACKDWF HGSCVDVDED DAPDIDIYHC PNCEKTHGKS 60
TLKKKKNWSK HDTGQSTDIK AVQNGSQVFI KELRSRTFPS ADDIVVKLSG SQLTMDYLEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGGAACAG AAAGCGTTTA TTTCTCGGCA TTTGAGCGTT CCACTACAGG GAAAAAACAT 60
CCGCAGGTCC ATTTTAGATC GATCTTTACG CTCATTCATC GGATCTAAAG CTGCTCCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005043	Anolis carolinensis	82.67	0.00e+00	830.00
IUUC-Ame-011579	Astyanax mexicanus	74.18	0.00e+00	640.00
IUUC-Bdi-014396	Brachypodium distachyon	40.38	3.00e-10	58.50
IUUC-Dre-028285	Danio rerio	88.89	0.00e+00	850.00
IUUC-Fal-037017	Ficedula albicollis	79.91	0.00e+00	828.00
IUUC-Gga-040290	Gallus gallus	80.34	0.00e+00	831.00
IUUC-Gma-042998	Glycine max	36.76	4.00e-12	64.70
IUUC-Hsa-046760	Homo sapiens	76.51	0.00e+00	809.00
IUUC-Hvu-047723	Hordeum vulgare	34.57	5.00e-10	57.80
IUUC-Loc-051927	Lepisosteus oculatus	73.63	0.00e+00	1406.00
IUUC-Mtr-057679	Medicago truncatula	44.00	1.00e-10	60.10
IUUC-Mmr-061132	Microcebus murinus	76.30	0.00e+00	805.00
IUUC-Mmu-063458	Mus musculus	79.42	0.00e+00	805.00
IUUC-Oba-075188	Oryza barthii	43.64	5.00e-11	61.20
IUUC-Obr-076844	Oryza brachyantha	43.64	4.00e-11	61.60
IUUC-Ogl-077260	Oryza glaberrima	43.64	4.00e-11	61.20
IUUC-Ogu-078663	Oryza glumaepatula	41.82	3.00e-11	62.00
IUUC-Oin-079351	Oryza indica	43.64	4.00e-11	61.60
IUUC-Olo-080411	Oryza longistaminata	41.82	1.00e-11	62.80
IUUC-Ome-081822	Oryza meridionalis	43.64	4.00e-11	61.60
IUUC-Oni-082662	Oryza nivara	43.64	4.00e-11	61.60
IUUC-Oru-084795	Oryza rufipogon	43.64	4.00e-11	61.60
IUUC-Osa-085385	Oryza sativa	43.64	4.00e-11	61.60
IUUC-Ola-087236	Oryzias latipes	93.81	0.00e+00	872.00
IUUC-Ptr-091328	Pan troglodytes	80.41	0.00e+00	793.00
IUUC-Pfo-096227	Poecilia formosa	84.84	0.00e+00	1588.00
IUUC-Pop-098853	Populus trichocarpa	38.46	4.00e-12	64.70
IUUC-Ppe-101758	Prunus persica	42.00	3.00e-10	58.50
IUUC-Sit-110411	Setaria italica	44.07	3.00e-12	65.10
IUUC-Sbi-114186	Sorghum bicolor	44.07	3.00e-12	65.10
IUUC-Tgu-117091	Taeniopygia guttata	80.48	0.00e+00	823.00
IUUC-Tru-118118	Takifugu rubripes	80.24	0.00e+00	1567.00
IUUC-Tni-120632	Tetraodon nigroviridis	78.98	0.00e+00	1519.00
IUUC-Tae-122704	Triticum aestivum	40.00	2.00e-11	62.40
IUUC-Tur-126461	Triticum urartu	40.00	1.00e-11	62.80
IUUC-Ttr-128194	Tursiops truncatus	78.96	0.00e+00	805.00
IUUC-Xma-134037	Xiphophorus maculatus	84.75	0.00e+00	1570.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence