iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112238

Ensembl Protein ID

PGSC0003DMT400055049

UniProt Accession

M1BX97; M1BX97_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400021358	PGSC0003DMT400055049	PGSC0003DMT400055049

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-31	109.6	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           +vp++f+CpIsle+M+dPv++++Gitydr++Iekw+ s ++ tcP t+q+lt  +l+Pn tlrr iq+wc  n+
   Q: 5    QVPPYFICPISLEMMKDPVTISTGITYDRENIEKWIFSAKNnTCPATKQSLTCIELTPNVTLRRFIQSWCTINA 78
           69**********************************6666669***************************8776 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEEIQVPPYF ICPISLEMMK DPVTISTGIT YDRENIEKWI FSAKNNTCPA TKQSLTCIEL 60
TPNVTLRRFI QSWCTINASH GIERFPTPKP PVSKPQIIKL LKEAKSPKMQ MKSLKRLRSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAATTTTC CAAAATATAC AAATGGAAGA AATCCAAGTA CCTCCTTATT TTATTTGCCC 60
GATTTCTCTA GAGATGATGA AAGATCCAGT CACGATCTCG ACTGGAATAA CATATGATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102601938

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000639	Aegilops tauschii	44.55	7.00e-87	313.00
IUUC-Aly-006194	Arabidopsis lyrata	55.85	8.00e-131	458.00
IUUC-Bdi-014627	Brachypodium distachyon	43.93	8.00e-93	332.00
IUUC-Hvu-047293	Hordeum vulgare	43.98	9.00e-87	312.00
IUUC-Lpe-051489	Leersia perrieri	42.86	2.00e-80	291.00
IUUC-Oba-075095	Oryza barthii	43.14	3.00e-77	281.00
IUUC-Obr-076623	Oryza brachyantha	39.92	2.00e-53	201.00
IUUC-Ogl-077664	Oryza glaberrima	44.83	2.00e-79	288.00
IUUC-Ogu-079030	Oryza glumaepatula	42.79	8.00e-76	276.00
IUUC-Oin-079734	Oryza indica	42.69	1.00e-75	276.00
IUUC-Ome-081839	Oryza meridionalis	44.77	3.00e-88	317.00
IUUC-Oni-082818	Oryza nivara	42.57	7.00e-77	280.00
IUUC-Opu-083355	Oryza punctata	44.60	3.00e-82	297.00
IUUC-Oru-085239	Oryza rufipogon	42.79	7.00e-76	276.00
IUUC-Osa-086041	Oryza sativa	42.79	8.00e-76	276.00
IUUC-Ppe-102059	Prunus persica	62.20	4.00e-149	520.00
IUUC-Sit-110734	Setaria italica	45.84	5.00e-92	330.00
IUUC-Sbi-114243	Sorghum bicolor	45.74	6.00e-95	339.00
IUUC-Tca-121107	Theobroma cacao	68.20	2.00e-159	553.00
IUUC-Tae-124641	Triticum aestivum	43.44	9.00e-92	329.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence