iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108947

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377579

Gene Name

SELMODRAFT_13569

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_13569	EFJ28718	EFJ28718

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-21	75.7	284	313
UBD/Beta-Prp	3.10e-42	145.5	186	415

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++sv++la+ s+ ++l s+s D +i vW+
   Q: 284  HKSSVNALALdSSsGYLYSASSDRSIVVWE 313
           9*********9556***************7 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls.................tgkcvhtlk 91
           h + ++c++    k+l++++s+d+++k+w++ ++k+l s+   h+++++av   ++  +  t++ D+ ik w+l                    + v +l+
   Q: 186  HADAVSCLAA--TKDLVFSASWDRSLKIWRAADWKCLNSVrAAHDDAINAVAAAQQ--FVYTAAADGKIKAWELCsnsqrssflggknkaqiGLSLVAVLE 282
           5666777888..9****************************************999..9*************66666679999999999999999999999 PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvh...pdg.nllvsGslDrtvrlWdlktgkllrtl....tgghtd 181
           +h++sv +l+++ s+ +l s+s+dr i vw+ e+     +    l+gh  +v c++++   +dg + l sGs+Drt+r+W+ ++ + ++      +g h++
   Q: 283  RHKSSVNALALDSSSGYLYSASSDRSIVVWEREETAMHMAavdALRGHCMAVLCLAISsgvQDGhFFLCSGSADRTIRVWSRERFTAIHSClcviKG-HQG 382
           ******************************9888877776899***********99863336889*****************777777666666487.*** PP
   S: 182  svysls...fdsng.......kelvsgsldgtvklw 207
           +v+s+s       +        ++vsg+ld++vk w
   Q: 383  PVKSVSmaaC---SsssigagARVVSGGLDRQVKTW 415
           ******6663...33347788*************99 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

SNSSSSIDFK LSIRSSYSHQ SSASSLPSVS SFQRGSSVDS ALLCLYTSCV FKNFPYKSLP 60
STTIASKSGI TALCATESPE LLLVGTESHG IHQNPCASKE IEAVGSRGGS IKAILEHQNC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCAATTCCT CGTCTTCCAT CGACTTTAAA CTCTCCATCA GATCTTCTTA TTCGCATCAG 60
TCCTCTGCCT CGAGCCTCCC ATCGGTCTCG TCCTTTCAGC GCGGTAGCAG CGTCGATTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_13569

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	42.51	2.00e-66	245.00
IUUC-Aly-006280	Arabidopsis lyrata	45.45	2.00e-66	245.00
IUUC-Bol-015495	Brassica oleracea	45.08	2.00e-61	229.00
IUUC-Bra-017464	Brassica rapa	45.78	4.00e-67	248.00
IUUC-Gma-043162	Glycine max	40.32	2.00e-66	246.00
IUUC-Lpe-050736	Leersia perrieri	41.76	2.00e-59	222.00
IUUC-Mtr-057789	Medicago truncatula	43.61	5.00e-61	227.00
IUUC-Mac-065257	Musa acuminata	45.02	1.00e-62	233.00
IUUC-Obr-076628	Oryza brachyantha	41.19	3.00e-54	205.00
IUUC-Ogl-076961	Oryza glaberrima	43.79	1.00e-50	193.00
IUUC-Ogu-078557	Oryza glumaepatula	37.58	8.00e-31	127.00
IUUC-Oin-079061	Oryza indica	37.58	8.00e-31	127.00
IUUC-Olo-080540	Oryza longistaminata	40.85	5.00e-42	164.00
IUUC-Ome-081476	Oryza meridionalis	44.26	3.00e-52	197.00
IUUC-Oni-083112	Oryza nivara	37.58	9.00e-31	127.00
IUUC-Oru-084254	Oryza rufipogon	37.58	1.00e-30	126.00
IUUC-Osa-086021	Oryza sativa	37.27	6.00e-31	127.00
IUUC-Pop-099212	Populus trichocarpa	37.53	6.00e-62	230.00
IUUC-Sit-109950	Setaria italica	44.13	4.00e-45	174.00
IUUC-Sly-111566	Solanum lycopersicum	43.55	1.00e-63	236.00
IUUC-Sbi-114374	Sorghum bicolor	41.89	2.00e-40	159.00
IUUC-Tca-121847	Theobroma cacao	47.30	1.00e-67	249.00
IUUC-Tae-125856	Triticum aestivum	40.00	2.00e-45	175.00
IUUC-Tur-126500	Triticum urartu	41.03	3.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence