iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114599

UUCD1 version

UUC-SoB-00728

Ensembl Protein ID

Sb04g023060.1

UniProt Accession

A0A194YQD5; A0A194YQD5_SORBI

Genbank Protein ID

KXG30439.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G181300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g023060	Sb04g023060.1	Sb04g023060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-08	33.6	93	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +++dg   ++lp CgH fha+C+ +w         + +CPlCr
   Q: 93   CAVCLAELQDGeeARFLPrCGHGFHAECVDMW------LVSHTTCPLCR 135
           ********55555777777*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTLGSILTVA GILLLFVIFA FGLASLQYCF QRSERRRRGP RTPAGGSTRG GGTMRTSTSG 60
GVDPELLRSL PVTVYHLATR GADKERQDAV VECAVCLAEL QDGEEARFLP RCGHGFHAEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGCTCG GCAGCATCCT CACCGTCGCG GGCATCCTCC TGCTCTTCGT CATCTTCGCC 60
TTCGGCCTCG CCTCCCTCCA GTACTGCTTC CAACGGAGCG AGCGGCGGCG CCGTGGTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002654	Amborella trichopoda	40.95	1.00e-20	92.00
IUUC-Bdi-014557	Brachypodium distachyon	46.93	3.00e-50	191.00
IUUC-Hvu-047609	Hordeum vulgare	50.92	3.00e-52	197.00
IUUC-Lpe-051726	Leersia perrieri	46.15	4.00e-41	160.00
IUUC-Mac-065260	Musa acuminata	42.72	5.00e-32	130.00
IUUC-Ome-081378	Oryza meridionalis	62.07	9.00e-34	136.00
IUUC-Oni-083072	Oryza nivara	59.80	3.00e-36	144.00
IUUC-Osa-085856	Oryza sativa	59.02	2.00e-36	145.00
IUUC-Sit-109797	Setaria italica	58.08	1.00e-41	162.00
IUUC-Tae-125062	Triticum aestivum	52.44	6.00e-53	199.00
IUUC-Tur-126867	Triticum urartu	60.47	6.00e-51	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence