iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114150

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G278600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031540	Sb04g031540.1	Sb04g031540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	7.30e-06	26.9	2	44

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 104  drlpeeilveilklldkeellraarvcrrwqelasqkalwktv 146
           d lp e++++i++lld+++l +a +vcr+w+ l+s+ +lw+++
   Q: 2    DGLPRELCLKIFHLLDHQSLASAPQVCRKWSALTSDGELWRKL 44
           679********************************9****987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDGLPRELCL KIFHLLDHQS LASAPQVCRK WSALTSDGEL WRKLFNDRWG ADAAAFYAPE 60
GDKSWKDVFV VQDRCDRYGL GVRIIREGKD YYLIYQGEIQ RYLGSRQDTD TDGDCGKDAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTCTCTCC TCTCCACTCG TCGTCCACCC CTCGTCCCTC GACCTCCTCT TCACCTTCAG 60
CTCCGGATCT GGAAGGCCGA GGAGCAGCCG CATGGTAGAA GACAAACAGG GCTTTCCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

KEGG

sbi:SORBI_04g031540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002989	Amborella trichopoda	50.96	3.00e-37	146.00
IUUC-Bdi-014933	Brachypodium distachyon	75.80	1.00e-62	231.00
IUUC-Gac-041399	Gasterosteus aculeatus	38.71	2.00e-07	50.10
IUUC-Gma-042975	Glycine max	54.88	2.00e-47	180.00
IUUC-Itr-048356	Ictidomys tridecemlineatus	35.82	1.00e-05	43.90
IUUC-Lch-049897	Latimeria chalumnae	45.28	8.00e-07	48.10
IUUC-Lpe-051216	Leersia perrieri	80.52	3.00e-70	256.00
IUUC-Mtr-058192	Medicago truncatula	52.41	3.00e-46	176.00
IUUC-Mmu-063551	Mus musculus	37.31	2.00e-06	46.20
IUUC-Mac-065052	Musa acuminata	63.64	3.00e-54	202.00
IUUC-Ont-072577	Oreochromis niloticus	40.68	7.00e-08	51.60
IUUC-Oan-072870	Ornithorhynchus anatinus	44.68	4.00e-06	45.80
IUUC-Obr-076604	Oryza brachyantha	76.28	2.00e-66	243.00
IUUC-Ogl-077760	Oryza glaberrima	82.47	1.00e-71	261.00
IUUC-Ogu-078908	Oryza glumaepatula	81.82	4.00e-71	258.00
IUUC-Oin-079955	Oryza indica	82.47	1.00e-71	261.00
IUUC-Ome-081325	Oryza meridionalis	82.47	1.00e-71	260.00
IUUC-Oru-084201	Oryza rufipogon	82.47	1.00e-71	260.00
IUUC-Osa-086284	Oryza sativa	87.50	6.00e-40	154.00
IUUC-Ola-087146	Oryzias latipes	41.67	4.00e-08	52.40
IUUC-Pma-094334	Petromyzon marinus	38.98	6.00e-08	52.00
IUUC-Sja-107879	Schizosaccharomyces japonicus	33.33	3.00e-09	56.20
IUUC-Sit-109751	Setaria italica	90.91	3.00e-76	276.00
IUUC-Sly-111663	Solanum lycopersicum	56.13	2.00e-43	167.00
IUUC-Stu-111936	Solanum tuberosum	56.21	1.00e-43	167.00
IUUC-Sar-113107	Sorex araneus	35.82	2.00e-05	43.50
IUUC-Tgu-117428	Taeniopygia guttata	34.29	2.00e-06	45.80
IUUC-Tru-117632	Takifugu rubripes	40.32	4.00e-08	52.40
IUUC-Tni-120602	Tetraodon nigroviridis	42.37	9.00e-08	51.20
IUUC-Tca-121034	Theobroma cacao	54.38	2.00e-43	167.00
IUUC-Vpa-130253	Vicugna pacos	35.82	1.00e-05	43.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence