iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014030

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100821416; BRADI_3g43630

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G43630	BRADI3G43630.1	BRADI3G43630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.10e-18	65.5	117	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 9    pIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           p++ ++M dPv+l+sG+++d+++  +w+ s+++tcPv +++l ++  vPn+ lr++i awc ++s
   Q: 117  PLMENVMDDPVTLASGYSVDQTYY-QWFVSQKNTCPVSGHSLPHSISVPNHLLRDMIAAWCLDHS 180
           9**********************9.89999999****************************9987 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MNSPRSAARS VRQQQAPSDV VSTSGLVPVQ AARTGIHKKD SSKQQPVVHT RSEFAATMQS 60
ALVKIQEAAA AGSKGEAAFA EMEQAMTGLM AVSYKEAEPA KLPRVFATRW AQDDANPLME 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTCCC CGAGATCAGC AGCAAGAAGC GTGCGCCAGC AGCAGGCACC GTCTGATGTC 60
GTCAGCACGT CAGGGCTGGT GCCCGTGCAG GCGGCAAGAA CTGGAATCCA CAAGAAAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100821416

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000999	Aegilops tauschii	65.63	7.00e-149	519.00
IUUC-Hvu-047644	Hordeum vulgare	62.75	2.00e-157	548.00
IUUC-Lpe-051369	Leersia perrieri	57.59	2.00e-122	431.00
IUUC-Oba-075958	Oryza barthii	58.54	9.00e-115	406.00
IUUC-Obr-076540	Oryza brachyantha	53.68	2.00e-120	426.00
IUUC-Ogl-077377	Oryza glaberrima	58.54	9.00e-115	406.00
IUUC-Ogu-078931	Oryza glumaepatula	58.54	8.00e-115	406.00
IUUC-Oin-079164	Oryza indica	58.09	7.00e-114	403.00
IUUC-Olo-080746	Oryza longistaminata	58.09	4.00e-114	404.00
IUUC-Ome-081914	Oryza meridionalis	58.76	4.00e-120	424.00
IUUC-Oni-083073	Oryza nivara	58.31	1.00e-110	392.00
IUUC-Opu-084043	Oryza punctata	58.09	2.00e-124	438.00
IUUC-Oru-084550	Oryza rufipogon	58.54	2.00e-114	405.00
IUUC-Osa-086120	Oryza sativa	58.54	2.00e-114	405.00
IUUC-Sit-109753	Setaria italica	54.02	1.00e-129	456.00
IUUC-Sbi-114025	Sorghum bicolor	59.52	3.00e-105	374.00
IUUC-Tae-124925	Triticum aestivum	59.35	3.00e-157	548.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence