iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005456

UUCD1 version

UUC-ArL-01261

Ensembl Protein ID

fgenesh1_pm.C_scaffold_6001734

UniProt Accession

D7M0S9; D7M0S9_ARALL

Genbank Protein ID

EFH50301.1

Protein Name

Ubiquitin carboxyl-terminal hydrolase 8

Genbank Nucleotide ID

GL348718

Gene Name

UBP8; ARALYDRAFT_326514

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_6001734	fgenesh1_pm.C_scaffold_6001734	fgenesh1_pm.C_scaffold_6001734

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.00e-108	362.3	299	888

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkk 79
           tGl+NlgNtC+mNS LQcL+++p+l +++l ++++++n +np ++kge++ ++ +l+++lw   ++ v+pr+++++l++
   Q: 299  TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGSSTVAPRTFKAKLAR 377
           7****************************************************************************** PP
   S: 80   eaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqik 155
           +a++fsg++q+D+qE+laflld+l+e+l++ +nkp+ e+++ d   + e  de ++++  +n+s+i+dl qgq+ks+++
   Q: 378  FAPQFSGFNQHDSQELLAFLLDGLHEDLNRVRNKPYVEAKDGDgrpDAEVADEYWRNHVARNDSIIVDLCQGQYKSTLV 456
           ***************************************998822234556669************************* PP
   S: 156  clecdnvssreepfldlslpvpgkeetkke................................................. 185
           c+ c++vs+ ++pf++lslp+p  + + +                                                  
   Q: 457  CPICKKVSVMFDPFMYLSLPLPCTSMRTMDltvmsadgsslpipltvnvpkfgkfedlhkalvtacslpeeetllvtev 535
           **********************9997766699*********************************************** PP
   S: 186  ............................................................................... 185
                                                                                          
   Q: 536  ynnriirfleeptdsltlirdgdklvvyrlkkdannsplivymhqkleeqfisgkssptwkafgiplvsrlcdvengsd 614
           ******************************************************************************* PP
   S: 186  ............................................................................... 185
                                                                                          
   Q: 615  lenlylkllssfkmptefftenlenrteeeatdkadtdgttsvedinstdvketteslpdpvlrlyltddrgnsiesei 693
           ******************************************************************************* PP
   S: 186  .................................................slqdcLesftkeeelegenkyycekckkkq 215
                                                            sl +cLe+f +ee l  ++++yc+ ck+++
   Q: 694  lkekpvnkskrvnvlarwpvkdldvydtclmsslpevskfgtkrpqesvSLFKCLEAFLTEEPLGPDDMWYCPGCKEHR 772
           ******************************************************************************* PP
   S: 216  eaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssG 293
           +a kkl+l++lPe+L++hLkRfs+s+   +++k++ +v+fpl  Ldls++ + ++ +   +++Y L+a+ +H+Gs+++G
   Q: 773  QAIKKLDLWRLPEILVIHLKRFSYSR--FMKNKLEAYVDFPLDdLDLSSYISYKNGQT--TYRYMLYAISNHYGSMGGG 847
           **********************9977..799*********************977766..9****************** PP
   S: 294  HYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           HY+ayv +  ++W+ fdDs+V+++++e++++   s aYvlfYkr
   Q: 848  HYTAYVHHGGDRWYDFDDSHVHPISQEKIKT---SAAYVLFYKR 888
           ********9999*******************...********98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNGTSSEESS DSTQRIDSFN GEQRVYFVPL RWWKDAQDSM PSESVDKREI LYTATTGSSY 60
GGPMKLINNI FNSDILFDLR REGDALQTGE TGEASVSGRD FALVSISNQT DSSMEFFLLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGGGA CATCGTCCGA GGAATCTTCC GATTCAACTC AGCGGATCGA TTCGTTCAAC 60
GGCGAGCAGA GAGTCTACTT CGTCCCCTTG AGGTATCTCC TCTCCTCACC GTCTCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_326514

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000058	Aegilops tauschii	46.93	0.00e+00	669.00
IUUC-Atr-002955	Amborella trichopoda	54.15	0.00e+00	858.00
IUUC-Ath-007677	Arabidopsis thaliana	93.21	0.00e+00	1583.00
IUUC-Ago-007911	Ashbya gossypii	40.39	4.00e-62	233.00
IUUC-Bdi-014404	Brachypodium distachyon	48.52	0.00e+00	769.00
IUUC-Bol-015699	Brassica oleracea	88.31	0.00e+00	1523.00
IUUC-Bra-017554	Brassica rapa	88.42	0.00e+00	1505.00
IUUC-Cgl-026741	Colletotrichum gloeosporioides	40.00	5.00e-57	216.00
IUUC-Cne-026852	Cryptococcus neoformans	45.85	3.00e-68	253.00
IUUC-Gma-043629	Glycine max	61.60	0.00e+00	1041.00
IUUC-Hvu-047108	Hordeum vulgare	50.07	0.00e+00	694.00
IUUC-Lpe-051047	Leersia perrieri	52.44	0.00e+00	823.00
IUUC-Lma-052981	Leptosphaeria maculans	36.68	2.00e-52	201.00
IUUC-Mtr-058489	Medicago truncatula	62.87	0.00e+00	1053.00
IUUC-Mac-065227	Musa acuminata	50.00	0.00e+00	755.00
IUUC-Oba-075553	Oryza barthii	45.66	0.00e+00	744.00
IUUC-Obr-076416	Oryza brachyantha	51.00	0.00e+00	796.00
IUUC-Ogl-077583	Oryza glaberrima	45.66	0.00e+00	744.00
IUUC-Ogu-078391	Oryza glumaepatula	48.30	0.00e+00	776.00
IUUC-Oin-079768	Oryza indica	49.83	0.00e+00	801.00
IUUC-Olo-080319	Oryza longistaminata	49.00	0.00e+00	751.00
IUUC-Ome-081819	Oryza meridionalis	50.23	0.00e+00	806.00
IUUC-Oni-082947	Oryza nivara	48.25	0.00e+00	785.00
IUUC-Opu-083770	Oryza punctata	46.29	0.00e+00	755.00
IUUC-Oru-084273	Oryza rufipogon	48.41	0.00e+00	786.00
IUUC-Osa-085641	Oryza sativa	45.77	0.00e+00	747.00
IUUC-Olu-087717	Ostreococcus lucimarinus	41.04	4.00e-126	444.00
IUUC-Pop-099333	Populus trichocarpa	67.23	0.00e+00	857.00
IUUC-Ppe-102062	Prunus persica	67.34	0.00e+00	813.00
IUUC-Sce-106170	Saccharomyces cerevisiae	37.10	6.00e-54	205.00
IUUC-Spo-108291	Schizosaccharomyces pombe	43.48	9.00e-70	258.00
IUUC-Smo-108686	Selaginella moellendorffii	52.70	1.00e-169	588.00
IUUC-Sit-109930	Setaria italica	52.03	0.00e+00	853.00
IUUC-Sly-111891	Solanum lycopersicum	60.56	0.00e+00	981.00
IUUC-Sbi-114549	Sorghum bicolor	51.19	0.00e+00	807.00
IUUC-Tca-121598	Theobroma cacao	62.93	0.00e+00	1073.00
IUUC-Tae-125811	Triticum aestivum	49.94	0.00e+00	793.00
IUUC-Tur-126478	Triticum urartu	47.25	0.00e+00	677.00
IUUC-Vvi-131066	Vitis vinifera	62.56	0.00e+00	1097.00
IUUC-Yli-134392	Yarrowia lipolytica	42.57	5.00e-64	239.00
IUUC-Zma-135361	Zea mays	51.07	0.00e+00	837.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence