iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_035201	EOY16408	EOY16408
TCM_035201	EOY16410	EOY16410
TCM_035201	EOY16413	EOY16413
TCM_035201	EOY16416	EOY16416
TCM_035201	EOY16415	EOY16415

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-15	57.2	636	669
E3 activity/RING/RING	3.40e-06	28.4	9	53

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgv 34
           gH++ v+ la s++ l sGs+Dgt+++W+l+++ 
   Q: 636  GHKSVVSTLAVSNGVLYSGSWDGTVRLWSLSDHS 669
           8**********669***************98876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl++++     p+vl CgH+ +++Cl   ++l+++  +++rCP C
   Q: 9    CPVCLQPYDGVcaiPRVLACGHTVCETCL---VNLPQKLPGAIRCPAC 53
           ********44233366777**********...677999********** PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MESQELPECP VCLQPYDGVC AIPRVLACGH TVCETCLVNL PQKLPGAIRC PACTVLVKYP 60
PEGPSTLPKN IELLRLIPGS GSTRKHVNKS PHDSRVPFLP RSWSDEFYSN WKIYILPSDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAAACAAG AGGGAGCTGA TGAATCCTCC AAGGATTGTA AACAGCTCCG ACGACGCTAA 60
CTTCCCTCTA TACATCTCTT GGAGCGAGAG AATGACAGTA AATAGAAGAA ACGAATACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	32.00	6.00e-83	301.00
IUUC-Atr-003105	Amborella trichopoda	39.58	3.00e-149	521.00
IUUC-Aly-006480	Arabidopsis lyrata	43.23	3.00e-166	578.00
IUUC-Ath-007227	Arabidopsis thaliana	47.83	0.00e+00	743.00
IUUC-Bdi-015002	Brachypodium distachyon	39.23	7.00e-119	421.00
IUUC-Bol-015912	Brassica oleracea	46.95	0.00e+00	714.00
IUUC-Bra-017564	Brassica rapa	48.37	0.00e+00	749.00
IUUC-Gma-043879	Glycine max	49.29	0.00e+00	741.00
IUUC-Hvu-047671	Hordeum vulgare	39.16	6.00e-125	440.00
IUUC-Lpe-051223	Leersia perrieri	36.86	1.00e-109	390.00
IUUC-Mtr-058342	Medicago truncatula	63.77	4.00e-107	380.00
IUUC-Mac-065113	Musa acuminata	39.77	2.00e-157	549.00
IUUC-Oba-075807	Oryza barthii	38.59	5.00e-124	437.00
IUUC-Obr-076101	Oryza brachyantha	35.75	9.00e-129	453.00
IUUC-Ogl-077321	Oryza glaberrima	37.41	2.00e-120	426.00
IUUC-Ogu-078456	Oryza glumaepatula	39.66	3.00e-118	418.00
IUUC-Oin-079822	Oryza indica	38.46	1.00e-123	436.00
IUUC-Olo-080336	Oryza longistaminata	40.72	5.00e-111	394.00
IUUC-Ome-081976	Oryza meridionalis	38.15	7.00e-119	421.00
IUUC-Oni-082359	Oryza nivara	38.43	2.00e-122	432.00
IUUC-Opu-083757	Oryza punctata	35.13	1.00e-126	446.00
IUUC-Oru-085207	Oryza rufipogon	38.52	4.00e-123	434.00
IUUC-Osa-085546	Oryza sativa	34.57	1.00e-68	253.00
IUUC-Ppa-095665	Physcomitrella patens	33.73	5.00e-58	218.00
IUUC-Pop-098862	Populus trichocarpa	55.32	0.00e+00	869.00
IUUC-Ppe-101295	Prunus persica	54.15	0.00e+00	808.00
IUUC-Smo-109481	Selaginella moellendorffii	28.62	2.00e-62	233.00
IUUC-Sit-110599	Setaria italica	37.20	1.00e-131	462.00
IUUC-Sly-111867	Solanum lycopersicum	61.42	2.00e-114	404.00
IUUC-Stu-112296	Solanum tuberosum	45.47	0.00e+00	674.00
IUUC-Sbi-114828	Sorghum bicolor	36.80	3.00e-125	441.00
IUUC-Tae-125330	Triticum aestivum	38.90	8.00e-131	460.00
IUUC-Tur-126303	Triticum urartu	41.47	2.00e-121	428.00
IUUC-Vvi-130947	Vitis vinifera	52.84	0.00e+00	843.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence