iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043084

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000845

Gene Name

LOC100815575; GLYMA_12G063700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G06860	GLYMA12G06860.1	GLYMA12G06860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-34	118.1	257	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+r++Iekwl+ g+ tcP+t+q+lt++ l+Pn++lr+li +wce+n++
   Q: 257  IPDDFRCPISLELMKDPVIVSTGQTYERTCIEKWLQAGHGTCPKTQQTLTSTVLTPNYVLRSLIAQWCEANGI 329
           89********************************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEGENASNKV IELMNEIASI SDYRPPVKKQ YCNLARRLKL LIPMFEEIRD MNKDALPDNT 60
SNAVLAFKEA LESAMELLRF GSEGSKLYLV LERDEIMNKF YKVTAQLEQS LGGISYDKLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAACTCGGT TACTTAGCTG TCTAAGCTTG AGCCGCCGCC GCCGCCACAA AATGATAATT 60
GGACCAACCA AGAGCGTCAT TACGCGTTTC TCTCTATCTA TCTAGCGTGT CTGAGAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100815575

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	67.09	0.00e+00	714.00
IUUC-Hvu-047052	Hordeum vulgare	65.17	0.00e+00	684.00
IUUC-Oin-079687	Oryza indica	63.27	0.00e+00	761.00
IUUC-Oni-082379	Oryza nivara	63.27	0.00e+00	760.00
IUUC-Oru-084885	Oryza rufipogon	63.43	0.00e+00	763.00
IUUC-Osa-085946	Oryza sativa	63.27	0.00e+00	759.00
IUUC-Sit-110392	Setaria italica	65.96	0.00e+00	737.00
IUUC-Tae-123188	Triticum aestivum	62.06	0.00e+00	745.00
IUUC-Tur-126448	Triticum urartu	66.96	0.00e+00	741.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence